RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TCN1P20061 433 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-222ENST00000621967 RHDQ02161 417 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 CREB5Q02930 508 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 LAMB3Q13751 1172 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 CBX2Q14781 532 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-222ENST00000621967 NPAS3Q8IXF0 933 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 AHI1Q8N157 1196 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 TTC16Q8NEE8 873 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 FGF13Q92913 245 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 TBATAQ96M53 351 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 ASB2Q96Q27 587 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 NDUFA13Q9P0J0 144 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 RIMKLBQ9ULI2 386 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 CPQQ9Y646 472 aa17.35■□□□□ 0.37
FAM3A-222ENST00000621967 C5orf42Q9H799 3197 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 H0YJX3 145 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 RAMP2O60895 175 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 SUPT7LO94864 414 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 EPOP01588 193 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 ATXN3P54252 364 aaPredicted RBP17.34■□□□□ 0.37
FAM3A-222ENST00000621967 YBEYP58557 167 aaPredicted RBP17.34■□□□□ 0.37
FAM3A-222ENST00000621967 SLC7A9P82251 487 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 POLD3Q15054 466 aaPredicted RBP17.34■□□□□ 0.37
FAM3A-222ENST00000621967 IL23RQ5VWK5 629 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 CLEC6AQ6EIG7 209 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 RIN3Q8TB24 985 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 ATP6V1E2Q96A05 226 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 C19orf60Q96EN9 201 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 SEMA3CQ99985 751 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 POLR1EQ9GZS1 481 aaKnown RBP17.34■□□□□ 0.37
FAM3A-222ENST00000621967 PLK2Q9NYY3 685 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.34■□□□□ 0.37
FAM3A-222ENST00000621967 TMEM181Q9P2C4 612 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 PRUNE2Q8WUY3 3088 aa17.34■□□□□ 0.37
FAM3A-222ENST00000621967 TCRBV3S1A0A5B6 114 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 PRORSD1PA6NEY8 169 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 MRASO14807 208 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 NRP2O60462 931 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 PRAMEF11O60813 436 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 GOT2P00505 430 aaKnown RBP17.33■□□□□ 0.37
FAM3A-222ENST00000621967 FGF4P08620 206 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 IRF1P10914 325 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 MAPKAPK2P49137 400 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 IRAK1BP1Q5VVH5 260 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 ALG1LQ6GMV1 187 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 RHEBL1Q8TAI7 183 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 DNAJC1Q96KC8 554 aaKnown RBP17.33■□□□□ 0.37
FAM3A-222ENST00000621967 UHRF1Q96T88 793 aaPredicted RBP17.33■□□□□ 0.37
FAM3A-222ENST00000621967 SMG9Q9H0W8 520 aaKnown RBP17.33■□□□□ 0.37
FAM3A-222ENST00000621967 ZNF696Q9H7X3 374 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 GDE1Q9NZC3 331 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 CRYL1Q9Y2S2 319 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 COMMD3-BMI1R4GMX3 469 aa17.33■□□□□ 0.37
FAM3A-222ENST00000621967 ANKRD12Q6UB98 2062 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 MUSKO15146 869 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 CD3EAPO15446 510 aaKnown RBP17.33■□□□□ 0.36
FAM3A-222ENST00000621967 RPP40O75818 363 aaKnown RBP17.33■□□□□ 0.36
FAM3A-222ENST00000621967 ALDOCP09972 364 aaKnown RBP17.33■□□□□ 0.36
FAM3A-222ENST00000621967 ZNF26P17031 533 aaPredicted RBP17.33■□□□□ 0.36
FAM3A-222ENST00000621967 ZNF37AP17032 561 aaPredicted RBP17.33■□□□□ 0.36
FAM3A-222ENST00000621967 OGNP20774 298 aaKnown RBP17.33■□□□□ 0.36
FAM3A-222ENST00000621967 ETFBP38117 255 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 CDKL1Q00532 357 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 RING1Q06587 406 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 SMAD4Q13485 552 aaKnown RBP17.33■□□□□ 0.36
FAM3A-222ENST00000621967 SEMA3AQ14563 771 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 C6orf10Q5SRN2 563 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 MRNIPQ6NTE8 343 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 ZNF354CQ86Y25 554 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 FUNDC1Q8IVP5 155 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 CLYBLQ8N0X4 340 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 NAT14Q8WUY8 206 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 LPGAT1Q92604 370 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 PLD4Q96BZ4 506 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 C3orf30Q96M34 536 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 ZSWIM3Q96MP5 696 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 PRICKLE1Q96MT3 831 aaPredicted RBP17.33■□□□□ 0.36
FAM3A-222ENST00000621967 SLC2A11Q9BYW1 496 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 PCDHAC1Q9H158 963 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 PDFQ9HBH1 243 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 GKN1Q9NS71 199 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 CROTQ9UKG9 612 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 CDH7Q9ULB5 785 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 AP4S1Q9Y587 144 aa17.33■□□□□ 0.36
FAM3A-222ENST00000621967 CCDC162PA2VCL2 907 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 GJB3O75712 270 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 SRP72O76094 671 aaKnown RBP17.32■□□□□ 0.36
FAM3A-222ENST00000621967 CDK14O94921 469 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 MTHFD2P13995 350 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 GPX3P22352 226 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 ACVRL1P37023 503 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 SH3BP2P78314 561 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 MYBPC1Q00872 1141 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 TYSND1Q2T9J0 566 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 C11orf91Q3C1V1 193 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 SAMD4BQ5PRF9 694 aaKnown RBP17.32■□□□□ 0.36
FAM3A-222ENST00000621967 SATL1Q86VE3 508 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 CIR1Q86X95 450 aaPredicted RBP17.32■□□□□ 0.36
FAM3A-222ENST00000621967 OR52K2Q8NGK3 314 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 OR9I1Q8NGQ6 314 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms