RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 MSS51Q4VC12 460 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 HOOK3Q86VS8 718 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 EID2Q8N6I1 236 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 PPHLN1Q8NEY8 458 aaKnown RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 GPBAR1Q8TDU6 330 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 RHBDD1Q8TEB9 315 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 SETD7Q8WTS6 366 aaKnown RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 NAT14Q8WUY8 206 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 SIGLEC10Q96LC7 697 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 TRIM31Q9BZY9 425 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 MRM3Q9HC36 420 aaKnown RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 XAB2Q9HCS7 855 aaKnown RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 TRNAU1APQ9NX07 287 aaKnown RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 NLGN3Q9NZ94 848 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 SOX13Q9UN79 622 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 U3KQA8 63 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 FAM187AA6NFU0 413 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 EFCAB8A8MWE9 144 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 YY2O15391 372 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 GOT2P00505 430 aaKnown RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 AK4P27144 223 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 ITGA8P53708 1063 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 SARNPP82979 210 aaKnown RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 CTBSQ01459 385 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 TMEM115Q12893 351 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 MORF4L2Q15014 288 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 FNBP1LQ5T0N5 605 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 DUPD1Q68J44 220 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 CES3Q6UWW8 571 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 NLRP9Q7RTR0 991 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 C11orf96Q7Z7L8 435 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 PCGF5Q86SE9 256 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 SFTPA2Q8IWL1 248 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 NXPE1Q8N323 547 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 FSTL5Q8N475 847 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 RASGEF1AQ8N9B8 481 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 HDAC10Q969S8 669 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 SNF8Q96H20 258 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 PWWP2AQ96N64 755 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 WDR83Q9BRX9 315 aaKnown RBP14.15□□□□□ -0.14
CBWD3-217ENST00000621474 ERP44Q9BS26 406 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 TOR4AQ9NXH8 423 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 SNX24Q9Y343 169 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 IGLV3-16A0A075B6K0 115 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 NEMP2A6NFY4 417 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 TPP1O14773 563 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 SIGLEC6O43699 453 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 SGTAO43765 313 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 VEGFDO43915 354 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 BANF1O75531 89 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 CDK14O94921 469 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 KCNK5O95279 499 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 CTSEP14091 401 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 ID4P47928 161 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 CTSCP53634 463 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 LAMB3Q13751 1172 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 SEMA3AQ14563 771 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 PUM1Q14671 1186 aaKnown RBP eCLIP14.14□□□□□ -0.15
CBWD3-217ENST00000621474 ELOCQ15369 112 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 TRADDQ15628 312 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 PROX2Q3B8N5 592 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 LDLRAP1Q5SW96 308 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 MAATS1Q7Z4T9 603 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 NOA1Q8NC60 698 aaKnown RBP14.14□□□□□ -0.15
CBWD3-217ENST00000621474 SGSM3Q96HU1 749 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 OR2M4Q96R27 311 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 RMI1Q9H9A7 625 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 GRHL1Q9NZI5 618 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 CACNA1AO00555 2505 aa14.14□□□□□ -0.15
CBWD3-217ENST00000621474 PRR19A6NJB7 356 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 GPR89AB7ZAQ6 455 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 GRID2O43424 1007 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 GPR89BP0CG08 455 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 CEACAM1P13688 526 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 ITGALP20701 1170 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 ACRV1P26436 265 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 ARCN1P48444 511 aaKnown RBP14.13□□□□□ -0.15
CBWD3-217ENST00000621474 NOVA1P51513 510 aaKnown RBP14.13□□□□□ -0.15
CBWD3-217ENST00000621474 CACNG1Q06432 222 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 TUBB2AQ13885 445 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 GPR33Q49SQ1 333 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 ZRANB3Q5FWF4 1079 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 GLRX5Q86SX6 157 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 TMEM135Q86UB9 458 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 GALNT13Q8IUC8 556 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 FAM181AQ8N9Y4 354 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 GDAP1Q8TB36 358 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 FCRL3Q96P31 734 aaPredicted RBP14.13□□□□□ -0.15
CBWD3-217ENST00000621474 LRRC1Q9BTT6 524 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 TUBB2BQ9BVA1 445 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 BOCQ9BWV1 1114 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 DPH5Q9H2P9 285 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 PLAC1Q9HBJ0 212 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 GULP1Q9UBP9 304 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 SLC23A2Q9UGH3 650 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 CRLS1Q9UJA2 301 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 SLC30A1Q9Y6M5 507 aa14.13□□□□□ -0.15
CBWD3-217ENST00000621474 ZCWPW2A0A1B0GU75 182 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 FAM237BA0A1B0GVD1 139 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SDR42E2A6NKP2 422 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms