RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TRIM58Q8NG06 486 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 FAM71BQ8TC56 605 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 FNIP1Q8TF40 1166 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 AENQ8WTP8 325 aaKnown RBP7.77□□□□□ -1.17
CLK1-215ENST00000621181 CCDC42Q96M95 316 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 ULBP3Q9BZM4 244 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 APMAPQ9HDC9 416 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 PDP2Q9P2J9 529 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 KLHL3Q9UH77 587 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 PCSK1NQ9UHG2 260 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 TMEM98Q9Y2Y6 226 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 JRKLQ9Y4A0 524 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 PLEKHM1Q9Y4G2 1056 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 KCTD3Q9Y597 815 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 SPENQ96T58 3664 aaKnown RBP7.77□□□□□ -1.17
CLK1-215ENST00000621181 TCRBV5S1A1TA0A578 114 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 LRRC53A6NM62 1247 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 AGPSO00116 658 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 SMAPO00193 183 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 KRT7P08729 469 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 NR1D1P20393 614 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 TEAD1P28347 426 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 HSPA9P38646 679 aaKnown RBP7.76□□□□□ -1.17
CLK1-215ENST00000621181 STAT5AP42229 794 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 MLLT10P55197 1068 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 OGDHQ02218 1023 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 DPTQ07507 201 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 NFATC2Q13469 925 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 CA9Q16790 459 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 PYCR3Q53H96 274 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 ARHGAP22Q7Z5H3 698 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 TSPAN33Q86UF1 283 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 BBS5Q8N3I7 341 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 ESX1Q8N693 406 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 COG1Q8WTW3 980 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 MIB2Q96AX9 1013 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 AP2M1Q96CW1 435 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 SCRN2Q96FV2 425 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 NSMCE3Q96MG7 304 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 PCMTD1Q96MG8 357 aaPredicted RBP7.76□□□□□ -1.17
CLK1-215ENST00000621181 ZNF599Q96NL3 588 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 SNRNP25Q9BV90 132 aaKnown RBP7.76□□□□□ -1.17
CLK1-215ENST00000621181 TLR10Q9BXR5 811 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 ZWILCHQ9H900 591 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 NOD2Q9HC29 1040 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 MED4Q9NPJ6 270 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 FBXO8Q9NRD0 319 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 ZNHIT2Q9UHR6 403 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 CD84Q9UIB8 345 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 PHTF1Q9UMS5 762 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 TMEM184BQ9Y519 407 aaPredicted RBP7.76□□□□□ -1.17
CLK1-215ENST00000621181 MRPS18BQ9Y676 258 aaKnown RBP7.76□□□□□ -1.17
CLK1-215ENST00000621181 KCNMB2Q9Y691 235 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 RPS6KL1Q9Y6S9 549 aa7.76□□□□□ -1.17
CLK1-215ENST00000621181 A0A0U1RQS6 177 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 MACROD2A1Z1Q3 448 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 PRPSAP2O60256 369 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 VPS4BO75351 444 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 RNF8O76064 485 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 AGFG2O95081 481 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 ASMTLO95671 621 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 SOD1P00441 154 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 MCM3P25205 808 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 MAXP61244 160 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 FOXM1Q08050 763 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 PTPRRQ15256 657 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 SPA17Q15506 151 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 CRTC2Q53ET0 693 aaPredicted RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 ARMC12Q5T9G4 340 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 TCTN3Q6NUS6 607 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 CHST15Q7LFX5 561 aaPredicted RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 NDUFAF2Q8N183 169 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 NSMCE1Q8WV22 266 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 SCAMP4Q969E2 229 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 SH3KBP1Q96B97 665 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 SCARF2Q96GP6 870 aaPredicted RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 CAPZA3Q96KX2 299 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 NUDCD1Q96RS6 583 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 KCTD15Q96SI1 283 aaPredicted RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 MGME1Q9BQP7 344 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 SPRY4Q9C004 299 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 VPS4AQ9UN37 437 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 PRRC2CQ9Y520 2896 aaKnown RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 INPP4BO15327 924 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 PGLSO95336 258 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 IPO7O95373 1038 aaKnown RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 PYGLP06737 847 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 CTPS1P17812 591 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 TNFAIP3P21580 790 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 TNFRSF8P28908 595 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 DLSTP36957 453 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 CD97P48960 835 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 EPHB1P54762 984 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 TRAF2Q12933 501 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 MMRN1Q13201 1228 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 GPS2Q13227 327 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 MAMLD1Q13495 774 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 ERV3-1Q14264 604 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 LRRC66Q68CR7 880 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms