RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 MAPKAPK2P49137 400 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 FBXW4P57775 412 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 HNRNPA0Q13151 305 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 EMC2Q15006 297 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 EPS8L1Q8TE68 723 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 DCAKDQ8WVC6 231 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MCCC2Q9HCC0 563 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 FAM50BQ9Y247 325 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RP1L1Q8IWN7 2480 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TCHHQ07283 1943 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 TO15178 435 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 UGT2B11O75310 529 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 IFNA14P01570 189 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 IL32P24001 234 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 LTKP29376 864 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 SSX2Q16385 188 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 SLC22A9Q8IVM8 553 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 HASPINQ8TF76 798 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 RNF31Q96EP0 1072 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 BCL7BQ9BQE9 202 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 KCNH7Q9NS40 1196 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PAK1IP1Q9NWT1 392 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF225Q9UK10 706 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PEX16Q9Y5Y5 336 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ANXA6P08133 673 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CD247P20963 164 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 KCNC1P48547 511 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 STAT5BP51692 787 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 FCGRTP55899 365 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 RABL3Q5HYI8 236 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 NEPROQ6NW34 567 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ARSKQ6UWY0 536 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 SV2AQ7L0J3 742 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PYROXD2Q8N2H3 581 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF433Q8N7K0 673 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 TBL1YQ9BQ87 522 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MXRA8Q9BRK3 442 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 NTMT1Q9BV86 223 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 SPATA9Q9BWV2 254 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MKRN2Q9H000 416 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 KAT8Q9H7Z6 458 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 COMMD9Q9P000 198 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CCNL1Q9UK58 526 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 KDM6AO15550 1401 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 PIP5K1BO14986 540 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 BCAS1O75363 584 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 FARS2O95363 451 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 M6PRP20645 277 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ILF3Q12906 894 aaKnown RBP eCLIP5□□□□□ -1.612e-6■■□□□ 13
VPS13D-214ENST00000620676 SEC23AQ15436 765 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 SPOUT1Q5T280 376 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 ZYG11AQ6WRX3 759 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MEIOBQ8N635 442 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF655Q8N720 491 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 MS4A12Q9NXJ0 267 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 TAS2R3Q9NYW6 316 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 EEF1E1O43324 174 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 PGK1P00558 417 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 JUPP14923 745 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 GPSM2P81274 684 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 IKBKEQ14164 716 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CEP97Q8IW35 865 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PTGR2Q8N8N7 351 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 C12orf29Q8N999 325 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 AGXT2Q9BYV1 514 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 LGALS8O00214 317 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PSMD9O00233 223 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ECE2O60344 883 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 NMBRP28336 390 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 AKT1P31749 480 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ETFRF1Q6IPR1 90 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 IKBIPQ70UQ0 350 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 TMEM151AQ8N4L1 468 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 AKTIPQ9H8T0 292 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PLSCR3Q9NRY6 295 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 HMGXB4Q9UGU5 601 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 GXYLT2A0PJZ3 443 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ERBB2P04626 1255 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CSN2P05814 226 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ARSAP15289 507 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 EPB42P16452 691 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CBLP22681 906 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PTPN6P29350 595 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 DLGAP5Q15398 846 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 SLFN11Q7Z7L1 901 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 GRAMD2AQ8IUY3 354 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 OR52E6Q96RD3 313 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PCDHB16Q9NRJ7 776 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 LY86O95711 162 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PRKG2Q13237 762 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ADGRG6Q86SQ4 1221 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ITIH5Q86UX2 942 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CAND1Q86VP6 1230 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 NT5DC4Q86YG4 428 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 NELL1Q92832 810 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MAP6Q96JE9 813 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 TCF25Q9BQ70 676 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CPQQ9Y646 472 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 RBP5P82980 135 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MSANTD2Q6P1R3 559 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms