RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 CD47Q08722 323 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 TRAF3Q13114 568 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 GALNT3Q14435 633 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 ACAP2Q15057 778 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 ZNF678Q5SXM1 525 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 ZNF362Q5T0B9 420 aaPredicted RBP13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 ANGPTL8Q6UXH0 198 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 DET1Q7L5Y6 550 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 P3H2Q8IVL5 708 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 SCML4Q8N228 414 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 OR2T12Q8NG77 320 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 RPL3LQ92901 407 aaKnown RBP13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 SLC35B4Q969S0 331 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 MTFMTQ96DP5 389 aaKnown RBP13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 GSTO2Q9H4Y5 243 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 ZNF385DQ9H6B1 395 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 TRMT13Q9NUP7 481 aaKnown RBP13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
CYFIP1-211ENST00000619348 ZNF701M0R085 212 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 C22orf31O95567 290 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 CD4P01730 458 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 PRDX3P30048 256 aaKnown RBP13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 DSC2Q02487 901 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 SV2CQ496J9 727 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 UBE2UQ5VVX9 321 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 NOTUMQ6P988 496 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 CENPIQ92674 756 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 SLC10A4Q96EP9 437 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 GPR78Q96P69 363 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 BBS2Q9BXC9 721 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 RNF38Q9H0F5 515 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 ACTR8Q9H981 624 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 ELP3Q9H9T3 547 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 USP3Q9Y6I4 520 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 SMIM28A0A1B0GU29 152 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 CASTOR2A6NHX0 329 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 ZNF99A8MXY4 864 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 DLGAP1O14490 977 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 SULT1C4O75897 302 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 TCF3P15923 654 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 TGFBR1P36897 503 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 ARSDP51689 593 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 HERVK_113P63132 956 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 PYCR3Q53H96 274 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 MIB1Q86YT6 1006 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 CYP2S1Q96SQ9 504 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 GMLQ99445 158 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 ERVK-6Q9BXR3 956 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 AFF4Q9UHB7 1163 aaKnown RBP13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 C3orf18Q9UK00 162 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 ZBTB42B2RXF5 422 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 PRKD3O94806 890 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 OR4F21O95013 312 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 PRSS56P0CW18 603 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 ALDH3A2P51648 485 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 AQP6Q13520 282 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 SKIV2LQ15477 1246 aaKnown RBP13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 MRNIPQ6NTE8 343 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 SLC27A1Q6PCB7 646 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 TRAF7Q6Q0C0 670 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 CLEC20AQ6ZU45 233 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 ANKRD13BQ86YJ7 626 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 S100ZQ8WXG8 99 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 PTERQ96BW5 349 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 CSF3RQ99062 836 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 TRMOQ9BU70 441 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 SLC39A8Q9C0K1 460 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 ERVK-18Q9QC07 812 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 FBXW11Q9UKB1 542 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 POLR3HQ9Y535 204 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-211ENST00000619348 A0A1W2PP18 115 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 BCKDKO14874 412 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 PAX3P23760 479 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 DMC1Q14565 340 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 KYAT1Q16773 422 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 MARC1Q5VT66 337 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 SULT1C3Q6IMI6 304 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 LCN8Q6JVE9 175 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 ENPP6Q6UWR7 440 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 GPRIN1Q7Z2K8 1008 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 OSTM1Q86WC4 334 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 PROX1Q92786 737 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 EXOC2Q96KP1 924 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 TEPSINQ96N21 525 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 MITFO75030 526 aaPredicted RBP13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 ALOX5P09917 674 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 ADCYAP1R1P41586 468 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 MCCD1P59942 119 aaPredicted RBP13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 EPS8Q12929 822 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 NPTX1Q15818 432 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 INAVAQ3KP66 663 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 PKDCCQ504Y2 493 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 KIAA0408Q6ZU52 694 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 PLPPR4Q7Z2D5 763 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 TAC4Q86UU9 113 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 ANKRD46Q86W74 232 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms