RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FOXP1	Q9H334	677 aa	Predicted RBP	4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CATSPERB	Q9H7T0	1116 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MINDY3	Q9H8M7	445 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RBM12	Q9NTZ6	932 aa	Known RBP	4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	WNT16	Q9UBV4	365 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TSPAN16	Q9UKR8	245 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	AP4E1	Q9UPM8	1137 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RTL1	A6NKG5	1358 aa		4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KTN1	Q86UP2	1357 aa	Known RBP	4.06	□□□□□ -1.76
UBE2D3-233	ENST00000618836		A0A1W2PQH9	124 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NPIPB8	E9PQR5	432 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836		H3BQF6	201 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	QSOX1	O00391	747 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ITGB1BP1	O14713	200 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	B4GAT1	O43505	415 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TLX2	O43763	284 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TRIM3	O75382	744 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	APOC1	P02654	83 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PTAFR	P25105	342 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PTPN3	P26045	913 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LCN1	P31025	176 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PIK3CG	P48736	1102 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PRPS1	P60891	318 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SPOCK1	Q08629	439 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DGCR6	Q14129	220 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GAMT	Q14353	236 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RPS6KA1	Q15418	735 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	HKDC1	Q2TB90	917 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	EFHC2	Q5JST6	749 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PDSS1	Q5T2R2	415 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CDCP2	Q5VXM1	449 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PEAR1	Q5VY43	1037 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PLEKHA7	Q6IQ23	1121 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ANO7	Q6IWH7	933 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FGD2	Q7Z6J4	655 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LHFPL4	Q7Z7J7	247 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TTC7B	Q86TV6	843 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NUDT13	Q86X67	352 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	HPS6	Q86YV9	775 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TIGD4	Q8IY51	512 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RCBTB1	Q8NDN9	531 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OR52J3	Q8NH60	311 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ACTRT2	Q8TDY3	377 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LRTOMT	Q8WZ04	291 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	IQCD	Q96DY2	449 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DPYSL5	Q9BPU6	564 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLC12A9	Q9BXP2	914 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	EPN3	Q9H201	632 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CHRD	Q9H2X0	955 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RMND5A	Q9H871	391 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	EVA1A	Q9H8M9	152 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OBP2B	Q9NPH6	170 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GPRC5C	Q9NQ84	441 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	EIF2B3	Q9NR50	452 aa	Known RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TDP1	Q9NUW8	608 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TMEM59L	Q9UK28	342 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	XDH	P47989	1333 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836		A0A0U1RQS6	177 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836		E7ENQ6	273 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CNOT3	O75175	753 aa	Known RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	BCAS1	O75363	584 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	UBXN7	O94888	489 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ANP32D	O95626	131 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KRT75	O95678	551 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	APOA1	P02647	267 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GNAO1	P09471	354 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TNNI3	P19429	210 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ATP5C1	P36542	298 aa	Known RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PSMB10	P40306	273 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	IRAK1	P51617	712 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	AP1S1	P61966	158 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FOXC1	Q12948	553 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TSPAN31	Q12999	210 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLA	Q13239	276 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TUBB2A	Q13885	445 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PIGH	Q14442	188 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LIPN	Q5VXI9	398 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NFRKB	Q6P4R8	1299 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TSSK4	Q6SA08	328 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	C5orf46	Q6UWT4	87 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CES3	Q6UWW8	571 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TMIGD1	Q6UXZ0	262 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GPRIN3	Q6ZVF9	776 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NIPA1	Q7RTP0	329 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DDX53	Q86TM3	631 aa	Known RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PRUNE1	Q86TP1	453 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SERINC5	Q86VE9	423 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ARMC8	Q8IUR7	673 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	C12orf29	Q8N999	325 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	POGLUT1	Q8NBL1	392 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OR2W6P	Q8NHA6	318 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PIWIL2	Q8TC59	973 aa	Known RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DPF1	Q92782	380 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PROX1	Q92786	737 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GDAP1L1	Q96MZ0	367 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms