RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 GRAMD4Q6IC98 578 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 PDE12Q6L8Q7 609 aaKnown RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 RFLNAQ6ZTI6 216 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 AHI1Q8N157 1196 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 AFAP1L2Q8N4X5 818 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 ASIC4Q96FT7 647 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 KLHL32Q96NJ5 620 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 LENG8Q96PV6 779 aaPredicted RBP17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 C19orf43Q9BQ61 176 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 THTPAQ9BU02 230 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 DPP7Q9UHL4 492 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 ZMYM5Q9UJ78 669 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 CRLS1Q9UJA2 301 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 PPIL1Q9Y3C6 166 aa17.19■□□□□ 0.34
PCDHGC3-205ENST00000617641 TTC34A8MYJ7 566 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 SLC9A3R1O14745 358 aaPredicted RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 PEX11AO75192 247 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 CYP17A1P05093 508 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 PIK3R1P27986 724 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 PPARGP37231 505 aaPredicted RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 VIPR2P41587 438 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 SH3BP2P78314 561 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 RBFAQ8N0V3 343 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 ARHGAP24Q8N264 748 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 CELF5Q8N6W0 485 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 LKAAEAR1Q8TD35 194 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 MAGEC3Q8TD91 643 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 MRGPRX3Q96LB0 322 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 FAM161BQ96MY7 647 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 ZNF641Q96N77 438 aaPredicted RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 MCCC1Q96RQ3 725 aaPredicted RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 BRD9Q9H8M2 597 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 MEAF6Q9HAF1 191 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 DUS2Q9NX74 493 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 YBX2Q9Y2T7 364 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 DHRS7Q9Y394 339 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 SYCE1LA8MT33 242 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 MAGEC1O60732 1142 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 CDK14O94921 469 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 POU2F2P09086 479 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 PRDX6P30041 224 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 PTSQ03393 145 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 KPNB1Q14974 876 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 UGT3A1Q6NUS8 523 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 GDPD4Q6W3E5 623 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 CBARPQ8N350 705 aaPredicted RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 CPSF7Q8N684 471 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 WDR60Q8WVS4 1066 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 TTC1Q99614 292 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 CIPCQ9C0C6 399 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 MTG2Q9H4K7 406 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 B4GALT6Q9UBX8 382 aa17.18■□□□□ 0.34
PCDHGC3-205ENST00000617641 RANBP2P49792 3224 aaKnown RBP17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 RPS3P23396 243 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 CCND1P24385 295 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 RECQLP46063 649 aaPredicted RBP17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 HK3P52790 923 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 ERVK-21P61565 698 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 CUL3Q13618 768 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 E2F5Q15329 346 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 SCUBE1Q8IWY4 988 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 SUGP1Q8IWZ8 645 aaKnown RBP17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 ST13P5Q8NFI4 369 aaPredicted RBP17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 CEP70Q8NHQ1 597 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 TRPC4APQ8TEL6 797 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 FRS2Q8WU20 508 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 SLC2A11Q9BYW1 496 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 MID1IP1Q9NPA3 183 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 NKX1-2Q9UD57 310 aaPredicted RBP17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 GNPTGQ9UJJ9 305 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 ATG2AQ2TAZ0 1938 aa17.17■□□□□ 0.34
PCDHGC3-205ENST00000617641 TM7SF2O76062 418 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 PBX2P40425 430 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 NRIP1P48552 1158 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 AGTR2P50052 363 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 RAP1GDS1P52306 607 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 SATB1Q01826 763 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 PPP1R3AQ16821 1122 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 C12orf40Q86WS4 652 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 GPSM1Q86YR5 675 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 ULK2Q8IYT8 1036 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 NXPE1Q8N323 547 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 YY1AP1Q9H869 796 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 COPG1Q9Y678 874 aaKnown RBP17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 NUP210Q8TEM1 1887 aaPredicted RBP17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 TRANK1O15050 2925 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 WASH3PC4AMC7 463 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 C1SP09871 688 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 ADH5P11766 374 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 INHBCP55103 352 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 SHHQ15465 462 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 GPR33Q49SQ1 333 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 CYHR1Q6ZMK1 362 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 SNX32Q86XE0 403 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 PBXIP1Q96AQ6 731 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 ABCG8Q9H221 673 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 UTP6Q9NYH9 597 aaKnown RBP17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 FBXO10Q9UK96 956 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 C5orf42Q9H799 3197 aa17.16■□□□□ 0.34
PCDHGC3-205ENST00000617641 TRIM16O95361 564 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms