RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SLC25A14O95258 325 aaPredicted RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 GUCA1CO95843 209 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 GFAPP14136 432 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 PFKLP17858 780 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 ATP5F1P24539 256 aaPredicted RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 NNMTP40261 264 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 RPL14P50914 215 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 PFKPQ01813 784 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 PTRHD1Q6GMV3 140 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 HSD11B1LQ7Z5J1 315 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 STK40Q8N2I9 435 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 BEND7Q8N7W2 519 aaPredicted RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 LEMD2Q8NC56 503 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 CD200R1Q8TD46 325 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 MYADMQ96S97 322 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 WWP1Q9H0M0 922 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 SFXN1Q9H9B4 322 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 ELOVL2Q9NXB9 296 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 RNF112Q9ULX5 631 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 TCF20Q9UGU0 1960 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 SOCS5O75159 536 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 TSPAN12O95859 305 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 IL1BP01584 269 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 APOA4P06727 396 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 C1SP09871 688 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 COL9A1P20849 921 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 PRDX3P30048 256 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 POLD2P49005 469 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 FOXA1P55317 472 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 PPP1R3AQ16821 1122 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 GAB4Q2WGN9 574 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 TPRG1Q6ZUI0 275 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 ASRGL1Q7L266 308 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 LMNTD2Q8IXW0 634 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 PELI3Q8N2H9 469 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 PCDH20Q8N6Y1 951 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 GBP7Q8N8V2 638 aaPredicted RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 ECHDC3Q96DC8 303 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 MIPEPQ99797 713 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 HEPHQ9BQS7 1158 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 PCDH12Q9NPG4 1184 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 SEMA4BQ9NPR2 832 aaPredicted RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 HACD3Q9P035 362 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 GIMAP2Q9UG22 337 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 DPP7Q9UHL4 492 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 TRMT6Q9UJA5 497 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 RBP1P09455 135 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 NQO1P15559 274 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 FCARP24071 287 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 MAPK1P28482 360 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 SERPINB5P36952 375 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 CSNK1DP48730 415 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 CLCN7P51798 805 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 HK3P52790 923 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 PRKAA2P54646 552 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 RAD51Q06609 339 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 CCDC15Q0P6D6 951 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 FNDC3BQ53EP0 1204 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 PDE12Q6L8Q7 609 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 USP45Q70EL2 814 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 GALNT7Q86SF2 657 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 TRPC4APQ8TEL6 797 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 PPM1EQ8WY54 764 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 ISG20Q96AZ6 181 aaKnown RBP7.72□□□□□ -1.17
NEK3-207ENST00000617054 ABHD8Q96I13 439 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 FAM83CQ9BQN1 747 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 SPATA16Q9BXB7 569 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 TBC1D10AQ9BXI6 508 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 CLPBQ9H078 707 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 DEC1Q9P2X7 70 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 CIDEBQ9UHD4 219 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 TMPRSS11EQ9UL52 423 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 RIMKLBQ9ULI2 386 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 DOCK9Q9BZ29 2069 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 C16orf96A6NNT2 1141 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 H7C0S8 307 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 MATN2O00339 956 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 PRMT5O14744 637 aaPredicted RBP7.71□□□□□ -1.17
NEK3-207ENST00000617054 SLC9A3R1O14745 358 aaPredicted RBP7.71□□□□□ -1.17
NEK3-207ENST00000617054 VPS26AO75436 327 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 ECI2O75521 394 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 DNAJC8O75937 253 aaPredicted RBP7.71□□□□□ -1.17
NEK3-207ENST00000617054 ADH1CP00326 375 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 ESRRAP11474 423 aaPredicted RBP7.71□□□□□ -1.17
NEK3-207ENST00000617054 TIMP2P16035 220 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 ACRV1P26436 265 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 SPAM1P38567 509 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 PTGER3P43115 390 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 SH3BP2P78314 561 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 ELF3P78545 371 aaPredicted RBP7.71□□□□□ -1.17
NEK3-207ENST00000617054 B4GALNT1Q00973 533 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 LSM12Q3MHD2 195 aaKnown RBP7.71□□□□□ -1.17
NEK3-207ENST00000617054 UNC50Q53HI1 259 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 ZNF678Q5SXM1 525 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 C6orf132Q5T0Z8 1188 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 UGT3A1Q6NUS8 523 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 EPGNQ6UW88 154 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 SCIMPQ6UWF3 145 aa7.71□□□□□ -1.17
NEK3-207ENST00000617054 SNX20Q7Z614 316 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms