RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 GLMNQ92990 594 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 CCDC3Q9BQI4 270 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 XAB2Q9HCS7 855 aaKnown RBP14.78□□□□□ -0.04
UBXN1-218ENST00000616865 HACD3Q9P035 362 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 PNMA8BQ9ULN7 279 aaPredicted RBP14.78□□□□□ -0.04
UBXN1-218ENST00000616865 SHOC2Q9UQ13 582 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 RP1P56715 2156 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 KIF26BQ2KJY2 2108 aa14.78□□□□□ -0.04
UBXN1-218ENST00000616865 A0A0J9YYE9 177 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 TCRBV7S3A2A0A539 114 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 B8ZZF3 427 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 LMO7DNF2Z398 122 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 AREL1O15033 823 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 CASC3O15234 703 aaKnown RBP14.77□□□□□ -0.05
UBXN1-218ENST00000616865 TRBC1P01850 177 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 SLC4A1P02730 911 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 ALPIP09923 528 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 PIRTP0C851 137 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 IVDP26440 423 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 SESN2P58004 480 aaPredicted RBP14.77□□□□□ -0.05
UBXN1-218ENST00000616865 YPEL5P62699 121 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 C1orf61Q13536 156 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 HLTFQ14527 1009 aaKnown RBP eCLIP14.77□□□□□ -0.05
UBXN1-218ENST00000616865 KIAA1614Q5VZ46 1190 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 FOXR1Q6PIV2 292 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 MACC1Q6ZN28 852 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 NAT8LQ8N9F0 302 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 MCUQ8NE86 351 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 CENPTQ96BT3 561 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 SCRN2Q96FV2 425 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 FRMD8Q9BZ67 464 aaPredicted RBP14.77□□□□□ -0.05
UBXN1-218ENST00000616865 GPR63Q9BZJ6 419 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 ARNT2Q9HBZ2 717 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 PIH1D1Q9NWS0 290 aaKnown RBP14.77□□□□□ -0.05
UBXN1-218ENST00000616865 BFARQ9NZS9 450 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 B4GALT6Q9UBX8 382 aa14.77□□□□□ -0.05
UBXN1-218ENST00000616865 CCDC187A0A096LP49 1063 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 C1orf232A0A0U1RR37 186 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 ESYT3A0FGR9 886 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 TMEM63AO94886 807 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 TNFSF15O95150 251 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 ANXA6P08133 673 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 ITGA2BP08514 1039 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 ELFN1P0C7U0 828 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 TPH1P17752 444 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 MMP12P39900 470 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 NPY2RP49146 381 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 DRG2P55039 364 aaKnown RBP14.76□□□□□ -0.05
UBXN1-218ENST00000616865 PLTPP55058 493 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 ARL4CP56559 192 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 CLN3Q13286 438 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 LAMB3Q13751 1172 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 SPIDRQ14159 915 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 DNAJC21Q5F1R6 531 aaKnown RBP14.76□□□□□ -0.05
UBXN1-218ENST00000616865 DENND2CQ68D51 928 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 HIBCHQ6NVY1 386 aaPredicted RBP14.76□□□□□ -0.05
UBXN1-218ENST00000616865 LRRC8BQ6P9F7 803 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 CCDC81Q6ZN84 652 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 DPPA4Q7L190 304 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 GLT6D1Q7Z4J2 308 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 SPOCK2Q92563 424 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 MED8Q96G25 268 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 WRAP53Q9BUR4 548 aaKnown RBP14.76□□□□□ -0.05
UBXN1-218ENST00000616865 SLC13A1Q9BZW2 595 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 CLPBQ9H078 707 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 TRABDQ9H4I3 376 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 SYNDIG1Q9H7V2 258 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 MAGEE1Q9HCI5 957 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 CASS4Q9NQ75 786 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 SAMD15Q9P1V8 674 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 DMGDHQ9UI17 866 aaKnown RBP14.76□□□□□ -0.05
UBXN1-218ENST00000616865 PPIL1Q9Y3C6 166 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 LRRK1Q38SD2 2015 aa14.76□□□□□ -0.05
UBXN1-218ENST00000616865 NPIPB15A6NHN6 443 aaPredicted RBP14.75□□□□□ -0.05
UBXN1-218ENST00000616865 C2orf81A6NN90 581 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 NTN3O00634 580 aaPredicted RBP14.75□□□□□ -0.05
UBXN1-218ENST00000616865 TOR1BO14657 336 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 YY2O15391 372 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 TM7SF2O76062 418 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 CRTAMO95727 393 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 MLNP12872 115 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 TSHRP16473 764 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 ZNF30P17039 623 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 GRIA1P42261 906 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 CUL1Q13616 776 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 POU6F1Q14863 301 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 HIF1AQ16665 826 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 TMEM52BQ4KMG9 183 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 DENND5AQ6IQ26 1287 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 ESRP1Q6NXG1 681 aaKnown RBP14.75□□□□□ -0.05
UBXN1-218ENST00000616865 CASC4Q6P4E1 433 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 PDIK1LQ8N165 341 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 TP53I13Q8NBR0 393 aaPredicted RBP14.75□□□□□ -0.05
UBXN1-218ENST00000616865 PPHLN1Q8NEY8 458 aaKnown RBP14.75□□□□□ -0.05
UBXN1-218ENST00000616865 LIN37Q96GY3 246 aaPredicted RBP14.75□□□□□ -0.05
UBXN1-218ENST00000616865 MCCC1Q96RQ3 725 aaPredicted RBP14.75□□□□□ -0.05
UBXN1-218ENST00000616865 C1QTNF7Q9BXJ2 289 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 FAM129AQ9BZQ8 928 aa14.75□□□□□ -0.05
UBXN1-218ENST00000616865 MBNL1Q9NR56 388 aaKnown RBP14.75□□□□□ -0.05
UBXN1-218ENST00000616865 MTRF1LQ9UGC7 380 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms