RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 STK17BO94768 372 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 LRIG2O94898 1065 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 PIGNO95427 931 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 IGSF6O95976 241 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 PDGFAP04085 211 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 GPS2Q13227 327 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 SQSTM1Q13501 440 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 CYP1B1Q16678 543 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 UGP2Q16851 508 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 RWDD4Q6NW29 188 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 PEBP4Q96S96 227 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 DDX47Q9H0S4 455 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 TAAR2Q9P1P5 351 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 PCSK1NQ9UHG2 260 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 ANKRD36A6QL64 1941 aa17.49■□□□□ 0.39
TRAPPC3-209ENST00000616395 PRSS38A1L453 326 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 ZNF487B1APH4 448 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 PPM1DO15297 605 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 ZNF189O75820 626 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 ZFXP17010 805 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 F8A1P23610 371 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 KDELR1P24390 212 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 ZNF135P52742 658 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 MC2RQ01718 297 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 SLC25A11Q02978 314 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 CCNG2Q16589 344 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 TMEM71Q6P5X7 295 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 CCDC137Q6PK04 289 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 ARFGAP1Q8N6T3 406 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 HSPH1Q92598 858 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 NTAN1Q96AB6 310 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 FAM129AQ9BZQ8 928 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 MAGEH1Q9H213 219 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 LRRC19Q9H756 370 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 PCYOX1Q9UHG3 505 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 TLK1Q9UKI8 766 aa17.48■□□□□ 0.39
TRAPPC3-209ENST00000616395 KDELR3O43731 214 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 RECQL5O94762 991 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 HOXC4P09017 264 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 FURINP09958 794 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 AK4P27144 223 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 COILP38432 576 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 MMP12P39900 470 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 ARL4AP40617 200 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 STAT5AP42229 794 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 MAPKAPK2P49137 400 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 RHOAP61586 193 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 GUCY2DQ02846 1103 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 PPP1R7Q15435 360 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 CA9Q16790 459 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 EIF2S3LQ2VIR3 472 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 ERMARDQ5T6L9 678 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 ERAP2Q6P179 960 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 FBXO38Q6PIJ6 1188 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 NLRP14Q86W24 1093 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 RFX6Q8HWS3 928 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 TBC1D31Q96DN5 1066 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 EXOC2Q96KP1 924 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 DPYSL5Q9BPU6 564 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 FERMT1Q9BQL6 677 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 GSDMCQ9BYG8 508 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 ZMYND15Q9H091 742 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 TRIT1Q9H3H1 467 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 CARS2Q9HA77 564 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 APMAPQ9HDC9 416 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 FZD10Q9ULW2 581 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 MAP4K5Q9Y4K4 846 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 TMEM184BQ9Y519 407 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 TSPAN11A1L157 253 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 A8MU76 341 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 RAD51CO43502 376 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 CREB3O43889 395 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 RAMP2O60895 175 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 RFPL1O75677 317 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 RARAP10276 462 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 TCF4P15884 667 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 RHOQP17081 205 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 TRIM23P36406 574 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 CDH6P55285 790 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 NRG1Q02297 640 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 ILF3Q12906 894 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 ERV3-1Q14264 604 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 SNAP47Q5SQN1 464 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 KAZNQ674X7 775 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 SLC30A9Q6PML9 568 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 CEACAM20Q6UY09 585 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 BZW1Q7L1Q6 419 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 ZSWIM9Q86XI8 627 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 NAGSQ8N159 534 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 PELI3Q8N2H9 469 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 ZNF768Q9H5H4 540 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 WDR26Q9H7D7 661 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 PDP2Q9P2J9 529 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 AMACRQ9UHK6 382 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 ATP8A1Q9Y2Q0 1164 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 PCDHB3Q9Y5E6 796 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 RPS6KL1Q9Y6S9 549 aa17.47■□□□□ 0.39
TRAPPC3-209ENST00000616395 hCG_1818297A0A087WSY0 165 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms