RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 DNAJC9Q8WXX5 260 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TOP1MTQ969P6 601 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 SPATA5L1Q9BVQ7 753 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 ENOPH1Q9UHY7 261 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 OR10H1Q9Y4A9 318 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 NDUFS1P28331 727 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 HSD17B2P37059 387 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 CRATP43155 626 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TRAF2Q12933 501 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 SIRPB2Q5JXA9 342 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 SCIMPQ6UWF3 145 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 WDR48Q8TAF3 677 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 KAT6AQ92794 2004 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 CASD1Q96PB1 797 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 CCT7Q99832 543 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TMEM109Q9BVC6 243 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 RIOK2Q9BVS4 552 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 COPG2Q9UBF2 871 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 CNTN6Q9UQ52 1028 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 PAPPAQ13219 1627 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 ERAL1O75616 437 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 FAM155BO75949 473 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 BEST1O76090 585 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 CLDN9O95484 217 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 EPORP19235 508 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 FGFR3P22607 806 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 EIF4HQ15056 248 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 FSTL4Q6MZW2 842 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ENPP7Q6UWV6 458 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 TDRPQ86YL5 185 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 IQCKQ8N0W5 287 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 BDH2Q9BUT1 245 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SUFUQ9UMX1 484 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 VPS4AQ9UN37 437 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 MTF2Q9Y483 593 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 LINC00032P0C843 101 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 IFNGR2P38484 337 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ACTR1BP42025 376 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 GJA8P48165 433 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ACTR1AP61163 376 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 COPZ1P61923 177 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 DEFB103AP81534 67 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ZYG11AQ6WRX3 759 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 LYSMD3Q7Z3D4 306 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 CPNE9Q8IYJ1 553 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 AADATQ8N5Z0 425 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF366Q8N895 744 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PPCDCQ96CD2 204 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 MYLK2Q9H1R3 596 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 CARS2Q9HA77 564 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ELOVL2Q9NXB9 296 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 FETUBQ9UGM5 382 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 CACNA1SQ13698 1873 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ANKRD66B4E2M5 251 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 DEAF1O75398 565 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 RECQL5O94762 991 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 TMEM63AO94886 807 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 CFIP05156 583 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PCSK2P16519 638 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ITGAXP20702 1163 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PPIBP23284 216 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 POU1F1P28069 291 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC1A2P43004 574 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 GNPDA1P46926 289 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 CORO7P57737 925 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF549Q6P9A3 640 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 RTL10Q7L3V2 364 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 TMCO2Q7Z6W1 182 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 NAT8LQ8N9F0 302 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 TTC29Q8NA56 475 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 OR13C4Q8NGS5 318 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 MRPL48Q96GC5 212 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 TPD52L3Q96J77 140 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 LRIG1Q96JA1 1093 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 C12orf66Q96MD2 445 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 CDRT15Q96T59 188 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ATG10Q9H0Y0 220 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SRMSQ9H3Y6 488 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 DCLRE1BQ9H816 532 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 BATF3Q9NR55 127 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC17A7Q9P2U7 560 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ANGPT4Q9Y264 503 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SIPA1L3O60292 1781 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 M0R3G1 203 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PI15O43692 258 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SNX3O60493 162 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 NTRK1P04629 796 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PRKCGP05129 697 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ALPIP09923 528 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PSMC3P17980 439 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PKNOX1P55347 436 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 FAM26DQ5JW98 314 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PRR23BQ6ZRT6 265 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SPATA19Q7Z5L4 167 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 C14orf80Q86SX3 495 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PARGQ86W56 976 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 DENND6AQ8IWF6 608 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 CYP4Z2PQ8N1L4 340 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SIDT2Q8NBJ9 832 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms