RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 GPR149Q86SP6 731 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 IGFN1Q86VF2 1251 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 DCP2Q8IU60 420 aaKnown RBP13.01□□□□□ -0.33
FOXN3-219ENST00000615335 C10orf107Q8IVU9 208 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 TNIP2Q8NFZ5 429 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 P2RY11Q96G91 374 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 ZNF597Q96LX8 424 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 RMND5AQ9H871 391 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 CXorf21Q9HAI6 301 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 DNAJC28Q9NX36 388 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 SYBUQ9NX95 663 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 SEPT10Q9P0V9 454 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 VANGL2Q9ULK5 521 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 ARHGAP26Q9UNA1 814 aa13.01□□□□□ -0.33
FOXN3-219ENST00000615335 FAM172BPA6NC97 362 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 SCAMP3O14828 347 aaKnown RBP13□□□□□ -0.33
FOXN3-219ENST00000615335 KLKB1P03952 638 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 HOXB8P17481 243 aaPredicted RBP13□□□□□ -0.33
FOXN3-219ENST00000615335 CEBPBP17676 345 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 PSMB4P28070 264 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 TYK2P29597 1187 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 S100A5P33763 92 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 GARSP41250 739 aaKnown RBP13□□□□□ -0.33
FOXN3-219ENST00000615335 ZNF846Q147U1 533 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 NETO2Q8NC67 525 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 CCNYQ8ND76 341 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 CAPSLQ8WWF8 208 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 WBP2Q969T9 261 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 CEP41Q9BYV8 373 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 OLAHQ9NV23 265 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 PNPOQ9NVS9 261 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 A0A1B0GTW7 788 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 A0A1W2PPW3 197 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 E9PAM4 449 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 ACSL4O60488 711 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 PAPLNO95428 1278 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 POLBP06746 335 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 MX2P20592 715 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 M6PRP20645 277 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 GP5P40197 560 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 IDH3AP50213 366 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 ZNF135P52742 658 aaPredicted RBP13□□□□□ -0.33
FOXN3-219ENST00000615335 DLX2Q07687 328 aaPredicted RBP13□□□□□ -0.33
FOXN3-219ENST00000615335 BNIP3Q12983 259 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 SMAD1Q15797 465 aaKnown RBP13□□□□□ -0.33
FOXN3-219ENST00000615335 PPM1JQ5JR12 505 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 CES5AQ6NT32 575 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 HCAR2Q8TDS4 363 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 RASSF5Q8WWW0 418 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 ZNF486Q96H40 463 aaPredicted RBP13□□□□□ -0.33
FOXN3-219ENST00000615335 FAR2Q96K12 515 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 ZSWIM3Q96MP5 696 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 SORT1Q99523 831 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 TMEM216Q9P0N5 145 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 CLEC1BQ9P126 229 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 AGO1Q9UL18 857 aaKnown RBP13□□□□□ -0.33
FOXN3-219ENST00000615335 CDC14AQ9UNH5 594 aa13□□□□□ -0.33
FOXN3-219ENST00000615335 PRKCGP05129 697 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 ERVK-10P10266 1014 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 RALBP11234 206 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 ERCC2P18074 760 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 POU3F3P20264 500 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-219ENST00000615335 FSHRP23945 695 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 HCAR3P49019 387 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 ABCE1P61221 599 aaKnown RBP12.99□□□□□ -0.33
FOXN3-219ENST00000615335 GALNT2Q10471 571 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 TUBA3CQ13748 450 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 AARS2Q5JTZ9 985 aaKnown RBP12.99□□□□□ -0.33
FOXN3-219ENST00000615335 SPANXN3Q5MJ09 141 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 NADSYN1Q6IA69 706 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 MAVSQ7Z434 540 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 ADAMTS19Q8TE59 1207 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 ZNF347Q96SE7 839 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 HOXD1Q9GZZ0 328 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 TDP1Q9NUW8 608 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 CFAP97Q9P2B7 532 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 COPG2Q9UBF2 871 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 ZMYM5Q9UJ78 669 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 LSM7Q9UK45 103 aaKnown RBP12.99□□□□□ -0.33
FOXN3-219ENST00000615335 CCL26Q9Y258 94 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 MYO18AQ92614 2054 aaKnown RBP12.99□□□□□ -0.33
FOXN3-219ENST00000615335 PSMD11O00231 422 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 SORBS2O94875 1100 aaKnown RBP12.99□□□□□ -0.33
FOXN3-219ENST00000615335 FKBP9O95302 570 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 IFNA8P32881 189 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 CTBSQ01459 385 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 HSPA14Q0VDF9 509 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 ATAT1Q5SQI0 421 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 GRTP1Q5TC63 336 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 FBXL22Q6P050 247 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 CES3Q6UWW8 571 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 KIAA2013Q8IYS2 634 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 ZNF567Q8N184 647 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 CERS2Q96G23 380 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 RPRD1AQ96P16 312 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-219ENST00000615335 CPNE1Q99829 537 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 TMEM79Q9BSE2 394 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 COPS7BQ9H9Q2 264 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-219ENST00000615335 C12orf10Q9HB07 376 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 MPP6Q9NZW5 540 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms