RNA–Protein interactions for RNA: ENST00000613405.4

TRAK1-210, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2 BASIC

Gene TRAK1, Length 4,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-210ENST00000613405 CLCQ05315 142 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 TYSND1Q2T9J0 566 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 NOL9Q5SY16 702 aaKnown RBP13.17□□□□□ -0.3
TRAK1-210ENST00000613405 XKR5Q6UX68 686 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 MACC1Q6ZN28 852 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 PTCHD4Q6ZW05 846 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 SNX27Q96L92 541 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 CHCHD6Q9BRQ6 235 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 IFT80Q9P2H3 777 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-210ENST00000613405 ZNF222Q9UK12 451 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 MFHAS1Q9Y4C4 1052 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 LYVE1Q9Y5Y7 322 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 FZD9O00144 591 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 KPNA3O00505 521 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-210ENST00000613405 CCL22O00626 93 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 PIP5K1BO14986 540 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 NR2F6P10588 404 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 PTPN3P26045 913 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 AQP1P29972 269 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 GNPDA1P46926 289 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 SMAD3P84022 425 aaKnown RBP13.17□□□□□ -0.3
TRAK1-210ENST00000613405 TAF10Q12962 218 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 DUSP4Q13115 394 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 HERC3Q15034 1050 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 PABPC1LQ4VXU2 614 aaKnown RBP13.17□□□□□ -0.3
TRAK1-210ENST00000613405 ATAD3BQ5T9A4 648 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 SLC34A3Q8N130 599 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 PIK3C3Q8NEB9 887 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 CLEC4CQ8WTT0 213 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 PTCD2Q8WV60 388 aaKnown RBP13.17□□□□□ -0.3
TRAK1-210ENST00000613405 TSPAN18Q96SJ8 248 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 HBEGFQ99075 208 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 HNRNPABQ99729 332 aaKnown RBP13.17□□□□□ -0.3
TRAK1-210ENST00000613405 LPIN3Q9BQK8 851 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 OXSMQ9NWU1 459 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 FAM240BA0A1B0GVZ2 78 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 NPEPPSL1A6NEC2 478 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 FAM159BA6NKW6 160 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 AQP12BA6NM10 295 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 TBX1O43435 398 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 OR10H3O60404 316 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 MT-CYBP00156 380 aaPredicted RBP13.17□□□□□ -0.3
TRAK1-210ENST00000613405 COPZ1P61923 177 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 ELP6Q0PNE2 266 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 RHBDF2Q6PJF5 856 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 AQP12AQ8IXF9 295 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 CFAP52Q8N1V2 620 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 TBATAQ96M53 351 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 PTGFRNQ9P2B2 879 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 TCAF1Q9Y4C2 921 aa13.17□□□□□ -0.3
TRAK1-210ENST00000613405 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 PRKAR1AP10644 381 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 OR1D2P34982 312 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 RABGGTBP53611 331 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 IKBKEQ14164 716 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 RELL1Q8IUW5 271 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 IZUMO1Q8IYV9 350 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 OSGEPL1Q9H4B0 414 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 TXNRD2Q9NNW7 524 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 EIF2B3Q9NR50 452 aaKnown RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 AZGP1P25311 298 aaKnown RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 SERPINA4P29622 427 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 FCHO2Q0JRZ9 810 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 AP3S1Q92572 193 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 BBS4Q96RK4 519 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 FTHL17Q9BXU8 183 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 NLNQ9BYT8 704 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 KAT8Q9H7Z6 458 aaKnown RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 PMF1-BGLAPU3KQ54 211 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 A0A1W2PQH9 124 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 ASGR1P07306 291 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 KLF1Q13351 362 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 KCNJ11Q14654 390 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 SPRYD7Q5W111 196 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 SDE2Q6IQ49 451 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 IKBIPQ70UQ0 350 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 GPR156Q8NFN8 814 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 TRIM8Q9BZR9 551 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 AGO3Q9H9G7 860 aaKnown RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 MAPRE3Q9UPY8 281 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 CCDC162PA2VCL2 907 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 YJEFN3A6XGL0 299 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 SSNA1O43805 119 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 PAX3P23760 479 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 NUP62P37198 522 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 CACUL1Q86Y37 369 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 ZBTB8BQ8NAP8 495 aaPredicted RBP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAK1-210ENST00000613405 CMTM6Q9NX76 183 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 PCDHB9Q9Y5E1 797 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 MYH8P13535 1937 aa13.16□□□□□ -0.3
TRAK1-210ENST00000613405 DUSP11O75319 330 aaKnown RBP13.15□□□□□ -0.3
TRAK1-210ENST00000613405 MTHFD1P11586 935 aaKnown RBP13.15□□□□□ -0.3
TRAK1-210ENST00000613405 PKMP14618 531 aaKnown RBP13.15□□□□□ -0.3
TRAK1-210ENST00000613405 MC4RP32245 332 aa13.15□□□□□ -0.3
TRAK1-210ENST00000613405 ENTPD1P49961 510 aa13.15□□□□□ -0.3
TRAK1-210ENST00000613405 OR10A6Q8NH74 314 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms