RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PAK1IP1Q9NWT1 392 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 HTRA2O43464 458 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 CHRNGP07510 517 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 CYP11B1P15538 503 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SLC6A4P31645 630 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 UBXN2AP68543 259 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 POU4F1Q01851 419 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FNBP1LQ5T0N5 605 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 RAB12Q6IQ22 244 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 OTOP3Q7RTS5 596 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 PEG10Q86TG7 708 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SLC7A14Q8TBB6 771 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 EXT2Q93063 718 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF594Q96JF6 807 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 PHB2Q99623 299 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 TRIM54Q9BYV2 358 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 RNF32Q9H0A6 362 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ABI2Q9NYB9 513 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 HOXC10Q9NYD6 342 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SLC17A7Q9P2U7 560 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 PLA2G4CQ9UP65 541 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SCN4AP35499 1836 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 E9PI62 339 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 EEF2KO00418 725 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 RGS13O14921 159 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 BET1O15155 118 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ZMPSTE24O75844 475 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 LBPP18428 481 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 GLRA2P23416 452 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 CAMK2BQ13554 666 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 CLEC16AQ2KHT3 1053 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 BEND5Q7L4P6 421 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 OR4A15Q8NGL6 344 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 OR6Q1Q8NGQ2 317 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 DCAKDQ8WVC6 231 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SKA2Q8WVK7 121 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 LPGAT1Q92604 370 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 NXPE2Q96DL1 559 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 C1GALT1C1Q96EU7 318 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 CSADQ9Y600 493 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 L7N2F9 121 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ACSL1P33121 698 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FNTBP49356 437 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 TOB1P50616 345 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF470Q6ECI4 717 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 CFAP77Q6ZQR2 320 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 KCNS3Q9BQ31 491 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 GANQ9H2C0 597 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 OCEL1Q9H607 264 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 TREM1Q9NP99 234 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 XDHP47989 1333 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 DOT1LQ8TEK3 1739 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 NT5C1B-RDH14C9J2C7 533 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 USP17L12C9JPN9 530 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 USP17L21D6R901 530 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 DFFAO00273 331 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 GNPDA1P46926 289 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FKBP1BP68106 108 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 STXBP5Q5T5C0 1151 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 NIPA1Q7RTP0 329 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SH3RF1Q7Z6J0 888 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SLC35F3Q8IY50 421 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 TMEM132CQ8N3T6 1108 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FAM46DQ8NEK8 389 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 RRNAD1Q96FB5 475 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 GNG8Q9UK08 70 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ASB4Q9Y574 426 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FSCN2O14926 492 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 GNA15P30679 374 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 WDR4P57081 412 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 NKAPLQ5M9Q1 402 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 CCNJQ5T5M9 372 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 LNX2Q8N448 690 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 UBR7Q8N806 425 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 OR6P1Q8NGX9 317 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 TM9SF4Q92544 642 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 RIOK2Q9BVS4 552 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 EVA1BQ9NVM1 165 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 RIMKLBQ9ULI2 386 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 CLEC4AQ9UMR7 237 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SLC28A2O43868 658 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 INMTO95050 263 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 DLDP09622 509 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 LEPRP48357 1165 aaKnown RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 GBX2P52951 348 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 FAM209AQ5JX71 171 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 NT5DC4Q86YG4 428 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 TMLHEQ9NVH6 421 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 KCNH1O95259 989 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 STAT3P40763 770 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 DNAJB7Q7Z6W7 309 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 RBFAQ8N0V3 343 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 BAP1Q92560 729 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 SLC5A5Q92911 643 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ATXN7L3BQ96GX2 97 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 DPAGT1Q9H3H5 408 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 XPNPEP3Q9NQH7 507 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF646O15015 1829 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-213ENST00000613099 NFAT5O94916 1531 aa4.92□□□□□ -1.62
VPS13D-213ENST00000613099 BCAS1O75363 584 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms