RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TADA1Q96BN2 335 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 AGAP3Q96P47 875 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 OLFM3Q96PB7 478 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 TBC1D10AQ9BXI6 508 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 CEP41Q9BYV8 373 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 SLC25A18Q9H1K4 315 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 SLC25A51Q9H1U9 297 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 ADNPQ9H2P0 1102 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 UCK1Q9HA47 277 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 ARFGAP3Q9NP61 516 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 PRDM8Q9NQV8 689 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 KLC4Q9NSK0 619 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 SHOC2Q9UQ13 582 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 COL12A1Q99715 3063 aa17.55■□□□□ 0.4
SSBP1-215ENST00000612337 ZNF891A8MT65 544 aaPredicted RBP17.54■□□□□ 0.4
SSBP1-215ENST00000612337 TERTO14746 1132 aaKnown RBP17.54■□□□□ 0.4
SSBP1-215ENST00000612337 PPP1R12AO14974 1030 aaPredicted RBP17.54■□□□□ 0.4
SSBP1-215ENST00000612337 CHUKO15111 745 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 SUV39H1O43463 412 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 AKR1B10O60218 316 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 PIRTP0C851 137 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 ZFXP17010 805 aaPredicted RBP17.54■□□□□ 0.4
SSBP1-215ENST00000612337 MAP4P27816 1152 aaKnown RBP17.54■□□□□ 0.4
SSBP1-215ENST00000612337 MAPK9P45984 424 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 CSRP3P50461 194 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 NFKB2Q00653 900 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 CDK18Q07002 472 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 TRIM14Q14142 442 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 FAM182AQ5T1J6 154 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 ZNF648Q5T619 568 aaPredicted RBP17.54■□□□□ 0.4
SSBP1-215ENST00000612337 ALS2CLQ60I27 953 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 ATG14Q6ZNE5 492 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 KDELC2Q7Z4H8 507 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 TMC3Q7Z5M5 1100 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 ADGRG6Q86SQ4 1221 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 PLXDC1Q8IUK5 500 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 NLGN4XQ8N0W4 816 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 NLGN4YQ8NFZ3 816 aaPredicted RBP17.54■□□□□ 0.4
SSBP1-215ENST00000612337 GLYATL1Q969I3 302 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 SLC45A3Q96JT2 553 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 PLEKHG4BQ96PX9 1271 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 CTRCQ99895 268 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 BRD8Q9H0E9 1235 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 ZNF711Q9Y462 761 aa17.54■□□□□ 0.4
SSBP1-215ENST00000612337 MN1Q10571 1320 aaPredicted RBP17.53■□□□□ 0.4
SSBP1-215ENST00000612337 MTA2O94776 668 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 ANKRD34CP0C6C1 535 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 XRCC1P18887 633 aaPredicted RBP17.53■□□□□ 0.4
SSBP1-215ENST00000612337 PTMSP20962 102 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 PCSK7Q16549 785 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 LRRC38Q5VT99 294 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 NPNTQ6UXI9 565 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 CATSPER2Q96P56 530 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 SRPK1Q96SB4 655 aaKnown RBP17.53■□□□□ 0.4
SSBP1-215ENST00000612337 EFHD1Q9BUP0 239 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 GPR63Q9BZJ6 419 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 TRIM4Q9C037 500 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 OSGEPL1Q9H4B0 414 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 GPN2Q9H9Y4 310 aaPredicted RBP17.53■□□□□ 0.4
SSBP1-215ENST00000612337 APMAPQ9HDC9 416 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 ZNHIT6Q9NWK9 470 aaKnown RBP17.53■□□□□ 0.4
SSBP1-215ENST00000612337 SCHIP1Q9P0W5 487 aaPredicted RBP17.53■□□□□ 0.4
SSBP1-215ENST00000612337 KLHL3Q9UH77 587 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 IL17BQ9UHF5 180 aa17.53■□□□□ 0.4
SSBP1-215ENST00000612337 TMEM184BQ9Y519 407 aaPredicted RBP17.53■□□□□ 0.4
SSBP1-215ENST00000612337 KMOO15229 486 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 SLC4A1P02730 911 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 C9P02748 559 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 KRT1P04264 644 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 BPIP17213 487 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 ABHD18Q0P651 414 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 INSCQ1MX18 579 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 TEX44Q53QW1 395 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 CRTC3Q6UUV7 619 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 TMEM26Q6ZUK4 368 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 TIPARPQ7Z3E1 657 aaKnown RBP17.52■□□□□ 0.4
SSBP1-215ENST00000612337 LRRTM4Q86VH4 590 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 RFX6Q8HWS3 928 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 RHOT2Q8IXI1 618 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 KIAA1143Q96AT1 154 aaPredicted RBP17.52■□□□□ 0.4
SSBP1-215ENST00000612337 TIMM29Q9BSF4 260 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 TRIT1Q9H3H1 467 aaKnown RBP17.52■□□□□ 0.4
SSBP1-215ENST00000612337 GLOD4Q9HC38 313 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 SLC23A2Q9UGH3 650 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 MAST4O15021 2626 aa17.52■□□□□ 0.4
SSBP1-215ENST00000612337 FLNCQ14315 2725 aa17.52■□□□□ 0.39
SSBP1-215ENST00000612337 A0A0A6YYK5 440 aaPredicted RBP17.51■□□□□ 0.39
SSBP1-215ENST00000612337 LOC101059948A0A1B0GTJ6 334 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 PRR19A6NJB7 356 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 POLR1CO15160 346 aaPredicted RBP17.51■□□□□ 0.39
SSBP1-215ENST00000612337 CBFA2T2O43439 604 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 VEGFDO43915 354 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 STK17BO94768 372 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 NDST3O95803 873 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 MT-CYBP00156 380 aaPredicted RBP17.51■□□□□ 0.39
SSBP1-215ENST00000612337 VIPP01282 170 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 ZNF7P17097 686 aaPredicted RBP17.51■□□□□ 0.39
SSBP1-215ENST00000612337 POLE2P56282 527 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 PLA2G4EQ3MJ16 856 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 ODF2Q5BJF6 829 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms