RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ADHFE1Q8IWW8 467 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 RBFAQ8N0V3 343 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TMEM132CQ8N3T6 1108 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TMCO5AQ8N6Q1 288 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 C8orf48Q96LL4 319 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 OR52E6Q96RD3 313 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 CHID1Q9BWS9 393 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 TRIM8Q9BZR9 551 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 SPASTQ9UBP0 616 aa8.62□□□□□ -1.03
LIG4-204ENST00000611712 GOLGA4Q13439 2230 aaKnown RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 A0A1B0GVM2 712 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 PRORSD1PA6NEY8 169 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ARPC2O15144 300 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 KCNA5P22460 613 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 MZF1P28698 734 aaPredicted RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 SERPINA4P29622 427 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 GALK1P51570 392 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 TUBB3Q13509 450 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 GRB7Q14451 532 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ZNF621Q6ZSS3 439 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 SCD5Q86SK9 330 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 CIPCQ9C0C6 399 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ABCG8Q9H221 673 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 RIBC2Q9H4K1 309 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 MEAF6Q9HAF1 191 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 GKN1Q9NS71 199 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 IGSF5Q9NSI5 407 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 POLR3BQ9NW08 1133 aaPredicted RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 FAM32AQ9Y421 112 aaKnown RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 A0A0D9SEW6 157 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 RECQL5O94762 991 aaPredicted RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 GSK3BP49841 420 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 C21orf59P57076 290 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 MTPNP58546 118 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 PRKCQQ04759 706 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 LRRC74AQ0VAA2 488 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 MERTKQ12866 999 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 CRHR2Q13324 411 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ATP1A4Q13733 1029 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 DMC1Q14565 340 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 TRIM16LQ309B1 348 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 HSF5Q4G112 596 aaPredicted RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 PABPC1LQ4VXU2 614 aaKnown RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 OTUD1Q5VV17 481 aaPredicted RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 BROXQ5VW32 411 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 FAM171BQ6P995 826 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 TAGAPQ8N103 731 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 FAM81AQ8TBF8 368 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 GLMNQ92990 594 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 NUSAP1Q9BXS6 441 aaKnown RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 ZFYVE1Q9HBF4 777 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ADGRE2Q9UHX3 823 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ZNF229Q9UJW7 825 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 U3KQV3 271 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 GNG14A0A1W2PPG7 69 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 F8W810 466 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ESR1P03372 595 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 OR56A5P0C7T3 313 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 UGT1A6P19224 532 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 PSMB9P28065 219 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ACADVLP49748 655 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ERVK-8P63133 956 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 SEMA3BQ13214 749 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 USP41Q3LFD5 358 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 SLC44A4Q53GD3 710 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 ZNF549Q6P9A3 640 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 DET1Q7L5Y6 550 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 DDX53Q86TM3 631 aaKnown RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 ISCA2Q86U28 154 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 AADATQ8N5Z0 425 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 BPIFB6Q8NFQ5 453 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 MCOLN3Q8TDD5 553 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 KIAA1191Q96A73 305 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 MYO19Q96H55 970 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 MAGED4Q96JG8 741 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 CEP19Q96LK0 163 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 MUC13Q9H3R2 512 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 CXorf21Q9HAI6 301 aa8.61□□□□□ -1.03
LIG4-204ENST00000611712 EVLQ9UI08 416 aaPredicted RBP8.61□□□□□ -1.03
LIG4-204ENST00000611712 NUP205Q92621 2012 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 SLC38A8A6NNN8 435 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 DENRO43583 198 aaKnown RBP8.6□□□□□ -1.03
LIG4-204ENST00000611712 PRAMEF11O60813 436 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 LRATO95237 230 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 PRAMEF1O95521 474 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 UMPSP11172 480 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 CD1DP15813 335 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 PTGER3P43115 390 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 GNPDA1P46926 289 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 GSSP48637 474 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 UFM1P61960 85 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 USP46P62068 366 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 SMARCB1Q12824 385 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 CHSY3Q70JA7 882 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 ERMP1Q7Z2K6 904 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 DBF4BQ8NFT6 615 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 EZH1Q92800 747 aaPredicted RBP8.6□□□□□ -1.03
LIG4-204ENST00000611712 SH3KBP1Q96B97 665 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 TMEM74Q96NL1 305 aa8.6□□□□□ -1.03
LIG4-204ENST00000611712 TSSK3Q96PN8 268 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms