RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 IPO8O15397 1037 aaKnown RBP4.5□□□□□ -1.69
LINC00540-201ENST00000611481 FFAR2O15552 330 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 CHMP2AO43633 222 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 CD99P14209 185 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 EPHA8P29322 1005 aaPredicted RBP4.5□□□□□ -1.69
LINC00540-201ENST00000611481 KRT9P35527 623 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 RAD52P43351 418 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 STT3AP46977 705 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 NPTX2P47972 431 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 SLC16A1P53985 500 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 STARD3Q14849 445 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 VEPH1Q14D04 833 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 TAF11Q15544 211 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 ISXQ2M1V0 245 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 C10orf76Q5T2E6 689 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 CENPPQ6IPU0 288 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 SLC27A1Q6PCB7 646 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 TMPRSS9Q7Z410 1059 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 DAAM2Q86T65 1068 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 TMEM150AQ86TG1 271 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 MON1AQ86VX9 555 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 NKAIN3Q8N8D7 197 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 ATAD1Q8NBU5 361 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 BEST2Q8NFU1 509 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 PSPC1Q8WXF1 523 aaKnown RBP4.5□□□□□ -1.69
LINC00540-201ENST00000611481 RFKQ969G6 155 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 RRP36Q96EU6 259 aaKnown RBP4.5□□□□□ -1.69
LINC00540-201ENST00000611481 APIPQ96GX9 242 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 ACOX2Q99424 681 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 CGRRF1Q99675 332 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 UBAC1Q9BSL1 405 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 QTRT1Q9BXR0 403 aaKnown RBP4.5□□□□□ -1.69
LINC00540-201ENST00000611481 PACSIN1Q9BY11 444 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 IMPG2Q9BZV3 1241 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 PLEKHA5Q9HAU0 1116 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 ITM2CQ9NQX7 267 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 SMYD2Q9NRG4 433 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 ELOVL5Q9NYP7 299 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 EHD3Q9NZN3 535 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 JKAMPQ9P055 326 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 ZNF580Q9UK33 172 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 SLC13A4Q9UKG4 626 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 SNX13Q9Y5W8 968 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 ACANP16112 2415 aa4.5□□□□□ -1.69
LINC00540-201ENST00000611481 KIF26BQ2KJY2 2108 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 A0A0B4J269 797 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 FAM86B1E9PN63 330 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 EIF3FO00303 357 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 INSIG1O15503 277 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 IRAK2O43187 625 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 FRS3O43559 492 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 PLOD3O60568 738 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 SKAP2O75563 359 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 JTBO76095 146 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 GFPT2O94808 682 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 FAM86B2P0C5J1 330 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 OSMP13725 252 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 ZFXP17010 805 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 OXTRP30559 389 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 SLC5A2P31639 672 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 QARSP47897 775 aaKnown RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 TPMTP51580 245 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 CLNS1AP54105 237 aaKnown RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 NAP1L1P55209 391 aaKnown RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 POU6F2P78424 691 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 TUBB3Q13509 450 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 LAMB3Q13751 1172 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 ZC2HC1CQ53FD0 456 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 LACTB2Q53H82 288 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 XKR3Q5GH77 459 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 CEP78Q5JTW2 689 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 PLA2G4FQ68DD2 849 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 ITPRIPL1Q6GPH6 555 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 CACUL1Q86Y37 369 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 RHOT1Q8IXI2 618 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 IL17RDQ8NFM7 739 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 MRPS31Q92665 395 aaKnown RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 FKBP10Q96AY3 582 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 HMCESQ96FZ2 354 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 SLC2A13Q96QE2 648 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 CYP2S1Q96SQ9 504 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 SEPT5Q99719 369 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 JPH2Q9BR39 696 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 NUDT16L1Q9BRJ7 211 aaKnown RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 ABCG4Q9H172 646 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 C6orf106Q9H6K1 298 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 RETREG1Q9H6L5 497 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 TRPC7Q9HCX4 862 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 WASH6PQ9NQA3 447 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 SH3GLB2Q9NR46 395 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 SERTAD4Q9NUC0 356 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 NKIRAS2Q9NYR9 191 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 SEPT10Q9P0V9 454 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 IFT80Q9P2H3 777 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 SEC63Q9UGP8 760 aaKnown RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 CORO2BQ9UQ03 480 aa4.49□□□□□ -1.69
LINC00540-201ENST00000611481 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 TP53BP1Q12888 1972 aaPredicted RBP4.49□□□□□ -1.69
LINC00540-201ENST00000611481 NUMA1Q14980 2115 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 IGLV3-22A0A075B6J6 115 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms