RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 APPL1Q9UKG1 709 aa27.79■■■□□ 2.04
CSPG5-205ENST00000610462 CAPN8A6NHC0 703 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 NCF1BA6NI72 391 aaPredicted RBP27.78■■■□□ 2.04
CSPG5-205ENST00000610462 NCF1CA8MVU1 366 aaPredicted RBP27.78■■■□□ 2.04
CSPG5-205ENST00000610462 BMP1P13497 986 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 NCF1P14598 390 aaPredicted RBP27.78■■■□□ 2.04
CSPG5-205ENST00000610462 ZNF7P17097 686 aaPredicted RBP27.78■■■□□ 2.04
CSPG5-205ENST00000610462 ME2P23368 584 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 RPS3P23396 243 aaKnown RBP eCLIP27.78■■■□□ 2.04
CSPG5-205ENST00000610462 ACADVLP49748 655 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 STX1BP61266 288 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 MMEL1Q495T6 779 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 PITRM1Q5JRX3 1037 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 REP15Q6BDI9 236 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 SNX20Q7Z614 316 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 CMTM8Q8IZV2 173 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 SLC25A23Q9BV35 468 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 TUBB1Q9H4B7 451 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 PCTPQ9UKL6 214 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 LRCH1Q9Y2L9 728 aa27.78■■■□□ 2.04
CSPG5-205ENST00000610462 FBP2O00757 339 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 CLDN7O95471 211 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 XRCC1P18887 633 aaPredicted RBP27.77■■■□□ 2.04
CSPG5-205ENST00000610462 SERPINA4P29622 427 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 AGTR2P50052 363 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 LRP8Q14114 963 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 FBXO48Q5FWF7 155 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 DDIASQ8IXT1 998 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 EMILIN2Q9BXX0 1053 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 CLPBQ9H078 707 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 ASB8Q9H765 288 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 CACNA2D2Q9NY47 1150 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 BCAP29Q9UHQ4 241 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 PTGDR2Q9Y5Y4 395 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 DOCK6Q96HP0 2047 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 SNX2O60749 519 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 SRCP12931 536 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 ITGALP20701 1170 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 PTRHD1Q6GMV3 140 aaKnown RBP27.77■■■□□ 2.04
CSPG5-205ENST00000610462 RPL10LQ96L21 214 aaKnown RBP27.77■■■□□ 2.04
CSPG5-205ENST00000610462 CD274Q9NZQ7 290 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 SARDHQ9UL12 918 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 ANKRD12Q6UB98 2062 aa27.77■■■□□ 2.04
CSPG5-205ENST00000610462 A0A1B0GTL3 188 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 MLYCDO95822 493 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 GLUD1P00367 558 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 GPX3P22352 226 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 CCR2P41597 374 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 CTSOP43234 321 aaPredicted RBP27.76■■■□□ 2.03
CSPG5-205ENST00000610462 PSME3P61289 254 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 SNRPD1P62314 119 aaKnown RBP27.76■■■□□ 2.03
CSPG5-205ENST00000610462 NFATC2Q13469 925 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 PHYKPLQ8IUZ5 450 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 RBFAQ8N0V3 343 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 TCF25Q9BQ70 676 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 IL26Q9NPH9 171 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 PCDHGA7Q9Y5G6 932 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 TRBV5-4A0A0C4DH59 114 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 H3BNX3 289 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 CRCPO75575 148 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 CA5AP35218 305 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 LYPLAL1Q5VWZ2 237 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 ZSWIM9Q86XI8 627 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 NUSAP1Q9BXS6 441 aaKnown RBP27.76■■■□□ 2.03
CSPG5-205ENST00000610462 HCFC1R1Q9NWW0 138 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 NUDT4Q9NZJ9 180 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 GNPTGQ9UJJ9 305 aa27.76■■■□□ 2.03
CSPG5-205ENST00000610462 VPS4BO75351 444 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 BPIP17213 487 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 STK19P49842 368 aaPredicted RBP27.75■■■□□ 2.03
CSPG5-205ENST00000610462 ERVFC1P60507 584 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 CDC16Q13042 620 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 FLOT2Q14254 428 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 ANO7Q6IWH7 933 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 PAOXQ6QHF9 649 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 ISG20Q96AZ6 181 aaKnown RBP27.75■■■□□ 2.03
CSPG5-205ENST00000610462 HGH1Q9BTY7 390 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 ADAMTS6Q9UKP5 1117 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 CCL26Q9Y258 94 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 IRAK3Q9Y616 596 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 MYOFQ9NZM1 2061 aa27.75■■■□□ 2.03
CSPG5-205ENST00000610462 ESRRBO95718 433 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 LBPP18428 481 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 HLA-FP30511 346 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 PSMD8P48556 350 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 GRB7Q14451 532 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 TGFBIQ15582 683 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 EFL1Q7Z2Z2 1120 aaKnown RBP27.74■■■□□ 2.03
CSPG5-205ENST00000610462 SYVN1Q86TM6 617 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 CBARPQ8N350 705 aaPredicted RBP27.74■■■□□ 2.03
CSPG5-205ENST00000610462 SNX31Q8N9S9 440 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 OR56A4Q8NGH8 313 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 OR9I1Q8NGQ6 314 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 VOPP1Q96AW1 172 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 MIEF2Q96C03 454 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 CCDC97Q96F63 343 aaPredicted RBP27.74■■■□□ 2.03
CSPG5-205ENST00000610462 LYSMD1Q96S90 227 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 POLG2Q9UHN1 485 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 HS3ST2Q9Y278 367 aa27.74■■■□□ 2.03
CSPG5-205ENST00000610462 BTRCQ9Y297 605 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms