RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 TMEM26Q6ZUK4 368 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PHF13Q86YI8 300 aaPredicted RBP11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 IQCKQ8N0W5 287 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 FDCSPQ8NFU4 85 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PIH1D2Q8WWB5 315 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 KLHL6Q8WZ60 621 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 KCTD15Q96SI1 283 aaPredicted RBP11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 MGME1Q9BQP7 344 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 TUBGCP2Q9BSJ2 902 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 UNKQ9C0B0 810 aaKnown RBP11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RARRES3Q9UL19 164 aa11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CNOT6Q9ULM6 557 aaKnown RBP11.6□□□□□ -0.55
PDLIM1P1-201ENST00000604187 AKAP9Q99996 3911 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 TACC2O95359 2948 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SSU72P8A0A1W2PR75 194 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 TCRBV5S1A1TA0A578 114 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PEX11BO96011 259 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 VIPP01282 170 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PDHA1P08559 390 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 FOLR1P15328 257 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 DESP17661 470 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 NELFEP18615 380 aaKnown RBP11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 STC1P52823 247 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 OGDHQ02218 1023 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CDK18Q07002 472 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RAPSNQ13702 412 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ELOAQ14241 798 aaKnown RBP11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PPP6R3Q5H9R7 873 aaPredicted RBP11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 IRGCQ6NXR0 463 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 DCUN1D2Q6PH85 259 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 MON1BQ7L1V2 547 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ZC3H18Q86VM9 953 aaKnown RBP11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 NLRP8Q86W28 1048 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 HPS6Q86YV9 775 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 CISD2Q8N5K1 135 aaKnown RBP11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ZDHHC12Q96GR4 267 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 RMI1Q9H9A7 625 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 KLC4Q9NSK0 619 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 ENTPD4Q9Y227 616 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 FARSAQ9Y285 508 aaKnown RBP11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SIK3Q9Y2K2 1263 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 PPIL1Q9Y3C6 166 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 SHANK1Q9Y566 2161 aa11.59□□□□□ -0.55
PDLIM1P1-201ENST00000604187 MED13Q9UHV7 2174 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PDZK1P1A8MUH7 402 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 FADS2P1A8MWK0 482 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 EIF3CLB5ME19 914 aaKnown RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ZNF185O15231 689 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 GRID2O43424 1007 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 MTA2O94776 668 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 TMEM63AO94886 807 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ZNF30P17039 623 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 XRCC1P18887 633 aaPredicted RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 LPOP22079 712 aaPredicted RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 SOX5P35711 763 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 SLC19A1P41440 591 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ITGA1P56199 1179 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PPP1CAP62136 330 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PDE1BQ01064 536 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 SEPT7Q16181 437 aaKnown RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PLA2G4EQ3MJ16 856 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PLEKHN1Q494U1 663 aaPredicted RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PPP1R15BQ5SWA1 713 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 CRTC3Q6UUV7 619 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 NDUFAF2Q8N183 169 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 BBS5Q8N3I7 341 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 AOPEPQ8N6M6 819 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 SIDT2Q8NBJ9 832 aaKnown RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 MR1Q95460 341 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 SLC41A2Q96JW4 573 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 RANBP9Q96S59 729 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PEBP4Q96S96 227 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 EIF3CQ99613 913 aaKnown RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 SNRNP25Q9BV90 132 aaKnown RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 GANQ9H2C0 597 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 SEPT11Q9NVA2 429 aaKnown RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 GPR83Q9NYM4 423 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ZNF624Q9P2J8 865 aaPredicted RBP11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PCSK1NQ9UHG2 260 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 BOLA1Q9Y3E2 137 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 CSMD2Q7Z408 3487 aa11.58□□□□□ -0.56
PDLIM1P1-201ENST00000604187 A0A0J9YYE9 177 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 NUAK1O60285 661 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 FZD6O60353 706 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 CPNE3O75131 537 aaKnown RBP11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 TRBC1P01850 177 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 EBLN1P0CF75 366 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ZNF8P17098 575 aaPredicted RBP11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 MMP13P45452 471 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 EPHB1P54762 984 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 DPYSQ14117 519 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 GPR18Q14330 331 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 RALGPS1Q5JS13 557 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 FAM69BQ5VUD6 431 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 MCEMP1Q8IX19 187 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ATPAF2Q8N5M1 289 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ADAMTS17Q8TE56 1095 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 FCRL4Q96PJ5 515 aa11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 MLPHQ9BV36 600 aaPredicted RBP11.57□□□□□ -0.56
PDLIM1P1-201ENST00000604187 OR2AG1Q9H205 316 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms