RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 CENPOQ9BU64 300 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 FABP12A6NFH5 140 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 FOXN2P32314 431 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 RAB2AP61019 212 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 TIGD4Q8IY51 512 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 RPS9P46781 194 aaKnown RBP8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF143P52747 638 aaPredicted RBP8.65□□□□□ -1.02
CSMD1-216ENST00000602557 KIF1AQ12756 1690 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 FSCN1Q16658 493 aaKnown RBP8.65□□□□□ -1.02
CSMD1-216ENST00000602557 INSCQ1MX18 579 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 HSD17B12Q53GQ0 312 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 SPATA31A5Q5VU36 1347 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 GPRIN3Q6ZVF9 776 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 SPATA31A7Q8IWB4 1347 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 LZTR1Q8N653 840 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 PPP1R13LQ8WUF5 828 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 PDP1Q9P0J1 537 aaPredicted RBP8.65□□□□□ -1.02
CSMD1-216ENST00000602557 COMMD3Q9UBI1 195 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ATP6AP2A0A1C7CYW4 349 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ATP6AP2O75787 350 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ALDH2P05091 517 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 BPGMP07738 259 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 CSH1P0DML2 217 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 CSH2P0DML3 217 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 CTSKP43235 329 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 TIGD2Q4W5G0 525 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 STAG3L4Q8TBR4 150 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 LPGAT1Q92604 370 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ANGPT4Q9Y264 503 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 SVILO95425 2214 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 CERS2Q96G23 380 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 MYOCOSA0A1B0GUC4 107 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ADRB2P07550 413 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 ERVK-5Q9HDB9 667 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 GRIP1Q9Y3R0 1128 aa8.65□□□□□ -1.02
CSMD1-216ENST00000602557 FADS2P1A8MWK0 482 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 OR10H3O60404 316 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 CLK3P49761 638 aaKnown RBP8.65□□□□□ -1.03
CSMD1-216ENST00000602557 GPAT3Q53EU6 434 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 TCEAL5Q5H9L2 206 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 IDNKQ5T6J7 187 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 UNC5AQ6ZN44 842 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 MSANTD1Q6ZTZ1 278 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 TEX47Q8TBZ9 253 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 C1QTNF7Q9BXJ2 289 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 ADAM28Q9UKQ2 775 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 TRIP11Q15643 1979 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 ANKDD1BA6NHY2 528 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 BUD31P41223 144 aaPredicted RBP8.65□□□□□ -1.03
CSMD1-216ENST00000602557 GPR1P46091 355 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 INTS11Q5TA45 600 aaKnown RBP8.65□□□□□ -1.03
CSMD1-216ENST00000602557 RAP1GAP2Q684P5 730 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 ASB18Q6ZVZ8 466 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 WNT8BQ93098 351 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 TMEM246Q9BRR3 403 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.65□□□□□ -1.03
CSMD1-216ENST00000602557 XPR1Q9UBH6 696 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 CORO2BQ9UQ03 480 aa8.65□□□□□ -1.03
CSMD1-216ENST00000602557 PDHXO00330 501 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 EPHB6O15197 1021 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 ULK1O75385 1050 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 RPL4P36578 427 aaKnown RBP8.64□□□□□ -1.03
CSMD1-216ENST00000602557 TTPAP49638 278 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 KAZALD1Q96I82 304 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 LGMNQ99538 433 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 PXDNQ92626 1479 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 A0A0J9YVX5 310 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 EPHX2P34913 555 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 BEX3Q00994 111 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 LIPEQ05469 1076 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF410Q86VK4 478 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 AIFM2Q9BRQ8 373 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 METTL8Q9H825 291 aaKnown RBP8.64□□□□□ -1.03
CSMD1-216ENST00000602557 ZNHIT2Q9UHR6 403 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 FTH1P02794 183 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 CD2P06729 351 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 PPP1R26Q5T8A7 1209 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-216ENST00000602557 UBE2UQ5VVX9 321 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 SEC14L1Q92503 715 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 ASB7Q9H672 318 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 AP3M1Q9Y2T2 418 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 RPLP0P05388 317 aaKnown RBP8.64□□□□□ -1.03
CSMD1-216ENST00000602557 MAB21L1Q13394 359 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 ACVR2BQ13705 512 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 DLG2Q15700 870 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 BATFQ16520 125 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 XKR6Q5GH73 641 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 LINGO2Q7L985 606 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 HAVCR1Q96D42 359 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 HEPHQ9BQS7 1158 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 PDCD2LQ9BRP1 358 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 OR2B2Q9GZK3 357 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 PAQR5Q9NXK6 330 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-216ENST00000602557 EIF2B4Q9UI10 523 aaKnown RBP8.64□□□□□ -1.03
CSMD1-216ENST00000602557 OR10H1Q9Y4A9 318 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 TNS2Q63HR2 1409 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 GRIN3BO60391 1043 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 HGFP14210 728 aa8.64□□□□□ -1.03
CSMD1-216ENST00000602557 PPIL2Q13356 520 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms