RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 ACTN2P35609 894 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 B4GALNT1Q00973 533 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 PDE1BQ01064 536 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 EIF3IQ13347 325 aaKnown RBP16.98■□□□□ 0.31
HERC3-214ENST00000601319 MSLNQ13421 630 aaPredicted RBP16.98■□□□□ 0.31
HERC3-214ENST00000601319 ITGA9Q13797 1035 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 OASLQ15646 514 aaKnown RBP16.98■□□□□ 0.31
HERC3-214ENST00000601319 DENND5AQ6IQ26 1287 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 LRRTM4Q86VH4 590 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 DDHD1Q8NEL9 900 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 BRSK1Q8TDC3 778 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 SLC37A2Q8TED4 501 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 PATE1Q8WXA2 126 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 ZNF578Q96N58 590 aaPredicted RBP16.98■□□□□ 0.31
HERC3-214ENST00000601319 TMEM74Q96NL1 305 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 TBL1YQ9BQ87 522 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 TIMM29Q9BSF4 260 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 ZCCHC2Q9C0B9 1178 aaKnown RBP16.98■□□□□ 0.31
HERC3-214ENST00000601319 LRRC40Q9H9A6 602 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 PPP2R2CQ9Y2T4 447 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 PRKAB1Q9Y478 270 aa16.98■□□□□ 0.31
HERC3-214ENST00000601319 URB1O60287 2271 aaKnown RBP16.98■□□□□ 0.31
HERC3-214ENST00000601319 A0A1W2PNU3 283 aaPredicted RBP16.97■□□□□ 0.31
HERC3-214ENST00000601319 C2orf81A6NN90 581 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 RHPN2P1A8MT19 583 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 KMOO15229 486 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 STX7O15400 261 aaKnown RBP16.97■□□□□ 0.31
HERC3-214ENST00000601319 METTL18O95568 372 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 CRTAMO95727 393 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 MPOP05164 745 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 STIP1P31948 543 aaKnown RBP16.97■□□□□ 0.31
HERC3-214ENST00000601319 GDF10P55107 478 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 ERVPABLB-1P60509 514 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 KHDC1Q4VXA5 237 aaKnown RBP16.97■□□□□ 0.31
HERC3-214ENST00000601319 C3orf38Q5JPI3 329 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 LDLRAP1Q5SW96 308 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 FAM151BQ6UXP7 276 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 B3GNT8Q7Z7M8 397 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 AVL9Q8NBF6 648 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 WDR36Q8NI36 951 aaKnown RBP16.97■□□□□ 0.31
HERC3-214ENST00000601319 ATG4AQ8WYN0 398 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 APOL2Q9BQE5 337 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 STRADBQ9C0K7 418 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 ARFGAP3Q9NP61 516 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 ASCL3Q9NQ33 180 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 TBC1D29Q9UFV1 150 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 SATB2Q9UPW6 733 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 KCNK6Q9Y257 313 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 ARL5AQ9Y689 179 aa16.97■□□□□ 0.31
HERC3-214ENST00000601319 KIR2DS5A0A0G2JLQ3 304 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 A0A0G2JNG1 304 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 ERI2A8K979 691 aaKnown RBP16.96■□□□□ 0.31
HERC3-214ENST00000601319 KIR2DS3K7RE56 304 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 PSMD3O43242 534 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 TLX3O43711 291 aaPredicted RBP16.96■□□□□ 0.31
HERC3-214ENST00000601319 PRAMEF1O95521 474 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 CPNE6O95741 557 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 AP2A1O95782 977 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 EML2O95834 649 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 F3P13726 295 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 ZNF140P52738 457 aaPredicted RBP16.96■□□□□ 0.31
HERC3-214ENST00000601319 INHBCP55103 352 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 ZFP36L1Q07352 338 aaKnown RBP16.96■□□□□ 0.31
HERC3-214ENST00000601319 SQSTM1Q13501 440 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 OLIG2Q13516 323 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 KIR2DS5Q14953 304 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 CHRNA6Q15825 494 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.96■□□□□ 0.31
HERC3-214ENST00000601319 ZNF648Q5T619 568 aaPredicted RBP16.96■□□□□ 0.31
HERC3-214ENST00000601319 ZNF547Q8IVP9 402 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 SLITRK4Q8IW52 837 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 Q8N9G6 341 aaPredicted RBP16.96■□□□□ 0.31
HERC3-214ENST00000601319 FGF11Q92914 225 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 SARS2Q9NP81 518 aaKnown RBP16.96■□□□□ 0.31
HERC3-214ENST00000601319 ZKSCAN5Q9Y2L8 839 aa16.96■□□□□ 0.31
HERC3-214ENST00000601319 IGSF10Q6WRI0 2623 aa16.96■□□□□ 0.3
HERC3-214ENST00000601319 OR5K4A6NMS3 321 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 PPM1DO15297 605 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 B4GAT1O43505 415 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 BUD23O43709 281 aaKnown RBP16.95■□□□□ 0.3
HERC3-214ENST00000601319 MTX2O75431 263 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 CDK14O94921 469 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 ZNF7P17097 686 aaPredicted RBP16.95■□□□□ 0.3
HERC3-214ENST00000601319 EIF2S3P41091 472 aaKnown RBP16.95■□□□□ 0.3
HERC3-214ENST00000601319 TMEM115Q12893 351 aaPredicted RBP16.95■□□□□ 0.3
HERC3-214ENST00000601319 BIRC2Q13490 618 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 GTF2H3Q13889 308 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 MAP9Q49MG5 647 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 DRICH1Q6PGQ1 229 aaPredicted RBP16.95■□□□□ 0.3
HERC3-214ENST00000601319 IYDQ6PHW0 289 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 CRTC3Q6UUV7 619 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 C11orf96Q7Z7L8 435 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 TMEM159Q96B96 161 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 PRR11Q96HE9 360 aaPredicted RBP16.95■□□□□ 0.3
HERC3-214ENST00000601319 DPYSL5Q9BPU6 564 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 TLR10Q9BXR5 811 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 STN1Q9H668 368 aaKnown RBP16.95■□□□□ 0.3
HERC3-214ENST00000601319 EPB41L5Q9HCM4 733 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 THSD1Q9NS62 852 aa16.95■□□□□ 0.3
HERC3-214ENST00000601319 PIKFYVEQ9Y2I7 2098 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms