RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 GABRB3P28472 473 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 DPP6P42658 865 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 NSG1P42857 185 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 CSE1LP55060 971 aaKnown RBP14.2□□□□□ -0.14
UPF1-211ENST00000600868 ADARP55265 1226 aaKnown RBP14.2□□□□□ -0.14
UPF1-211ENST00000600868 MPP1Q00013 466 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 NFATC4Q14934 902 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 KDM7AQ6ZMT4 941 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 Q6ZSR6 202 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 STRA8Q7Z7C7 330 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 DCP2Q8IU60 420 aaKnown RBP14.2□□□□□ -0.14
UPF1-211ENST00000600868 PNPLA1Q8N8W4 532 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 GDAP1Q8TB36 358 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 SLC44A1Q8WWI5 657 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 LPGAT1Q92604 370 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 KLHDC7BQ96G42 594 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 DCUN1D1Q96GG9 259 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 MCMBPQ9BTE3 642 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 ZCCHC2Q9C0B9 1178 aaKnown RBP14.2□□□□□ -0.14
UPF1-211ENST00000600868 MIR1-1HGQ9H1L0 117 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 PPCSQ9HAB8 311 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 FBXO6Q9NRD1 293 aaPredicted RBP14.2□□□□□ -0.14
UPF1-211ENST00000600868 AASDHPPTQ9NRN7 309 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 TXNDC16Q9P2K2 825 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 SLC17A6Q9P2U8 582 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 PSAT1Q9Y617 370 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 OAS3Q9Y6K5 1087 aaKnown RBP14.2□□□□□ -0.14
UPF1-211ENST00000600868 CUL9Q8IWT3 2517 aa14.2□□□□□ -0.14
UPF1-211ENST00000600868 TNRC6BQ9UPQ9 1833 aaKnown RBP14.2□□□□□ -0.14
UPF1-211ENST00000600868 SPAG17Q6Q759 2223 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 PRR5-ARHGAP8B1AHC4 643 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 GPR89AB7ZAQ6 455 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 PRMT5O14744 637 aaPredicted RBP14.19□□□□□ -0.14
UPF1-211ENST00000600868 MAGEC1O60732 1142 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 TCEA3O75764 348 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 HAUS5O94927 633 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 SHBGP04278 402 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 GPR89BP0CG08 455 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 ATP1B2P14415 290 aaPredicted RBP14.19□□□□□ -0.14
UPF1-211ENST00000600868 GNSP15586 552 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 KELP23276 732 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 HTR1BP28222 390 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 AKT1P31749 480 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 HOXD12P35452 270 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 GP5P40197 560 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 CD151P48509 253 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 B4GALNT1Q00973 533 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 TMEM115Q12893 351 aaPredicted RBP14.19□□□□□ -0.14
UPF1-211ENST00000600868 PTK2BQ14289 1009 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 KHDC1Q4VXA5 237 aaKnown RBP14.19□□□□□ -0.14
UPF1-211ENST00000600868 ZNF789Q5FWF6 425 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 GRTP1Q5TC63 336 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 PEAR1Q5VY43 1037 aaPredicted RBP14.19□□□□□ -0.14
UPF1-211ENST00000600868 CNSTQ6PJW8 725 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 PRR23BQ6ZRT6 265 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 ADGRG6Q86SQ4 1221 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 TRIM74Q86UV6 250 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 IQCKQ8N0W5 287 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 OR13H1Q8NG92 308 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 LOXL4Q96JB6 756 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 PAFAH2Q99487 392 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 DHRS4Q9BTZ2 278 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 BOCQ9BWV1 1114 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 P2RY12Q9H244 342 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 SUSD2Q9UGT4 822 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 SLC24A2Q9UI40 661 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 PILRBQ9UKJ0 227 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 CORO1CQ9ULV4 474 aaPredicted RBP14.19□□□□□ -0.14
UPF1-211ENST00000600868 SLC17A4Q9Y2C5 497 aa14.19□□□□□ -0.14
UPF1-211ENST00000600868 A0A1B0GTW7 788 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 POC1B-GALNT4F8VUJ3 575 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 TLR4O00206 839 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 TNFRSF10CO14798 259 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 OR1I1O60431 355 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 MTX2O75431 263 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 CDK14O94921 469 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 AP2A2O94973 939 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 ESR1P03372 595 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 WNT1P04628 370 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 IVLP07476 585 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 THEGLP0DJG4 465 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 MSH2P43246 934 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 AFF3P51826 1226 aaKnown RBP14.18□□□□□ -0.14
UPF1-211ENST00000600868 THOP1P52888 689 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 EIF3BP55884 814 aaKnown RBP14.18□□□□□ -0.14
UPF1-211ENST00000600868 TCF15Q12870 199 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 GTF2H3Q13889 308 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 PDE1CQ14123 709 aaPredicted RBP14.18□□□□□ -0.14
UPF1-211ENST00000600868 ZNF648Q5T619 568 aaPredicted RBP14.18□□□□□ -0.14
UPF1-211ENST00000600868 MACC1Q6ZN28 852 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 ZC3HC1Q86WB0 502 aaKnown RBP14.18□□□□□ -0.14
UPF1-211ENST00000600868 SYT12Q8IV01 421 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 CNPY4Q8N129 248 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 SLC22A18ASQ8N1D0 253 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 RASGEF1AQ8N9B8 481 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 PRSS33Q8NF86 280 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 ANKRD7Q92527 254 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 SKA1Q96BD8 255 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 CCDC97Q96F63 343 aaPredicted RBP14.18□□□□□ -0.14
UPF1-211ENST00000600868 SCARF2Q96GP6 870 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms