RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PDK3Q15120 406 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 MAPRE2Q15555 327 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 LCA5Q86VQ0 697 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 LILRA2Q8N149 483 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 METTL6Q8TCB7 284 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 GRIN3AQ8TCU5 1115 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 CORO1BQ9BR76 489 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 CIPCQ9C0C6 399 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 CLPBQ9H078 707 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 SPAG4Q9NPE6 437 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZNHIT2Q9UHR6 403 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 VWA8A3KMH1 1905 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 KRT87PA6NCN2 255 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 TRIM38O00635 465 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 FKTNO75072 461 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 CKMT2P17540 419 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZNF140P52738 457 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 YBX1P67809 324 aaKnown RBP11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 TIAL1Q01085 375 aaKnown RBP eCLIP11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 TAF1AQ15573 450 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 C6orf10Q5SRN2 563 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 CXorf57Q6NSI4 855 aaKnown RBP11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 IL27RAQ6UWB1 636 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 SPPL2CQ8IUH8 684 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 MIER2Q8N344 545 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 SLAIN1Q8ND83 568 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZNF558Q96NG5 402 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 FEM1AQ9BSK4 669 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 SLC25A23Q9BV35 468 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 NOL11Q9H8H0 719 aaKnown RBP11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 NLE1Q9NVX2 485 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 IL37Q9NZH6 218 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 POLG2Q9UHN1 485 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 BCAP29Q9UHQ4 241 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 FAF1Q9UNN5 650 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 PCDHGA7Q9Y5G6 932 aa11.44□□□□□ -0.58
ARHGEF1-220ENST00000600274 ILVBLA1L0T0 632 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 INPPL1O15357 1258 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 SYNCRIPO60506 623 aaKnown RBP11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 SH3BGRLO75368 114 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 HSPA7P48741 367 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 TSTA3Q13630 321 aaPredicted RBP11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 NFYCQ13952 458 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 RABL3Q5HYI8 236 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 MBOAT1Q6ZNC8 495 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 RBM44Q6ZP01 1051 aaKnown RBP11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 RETREG3Q86VR2 466 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 CMTM8Q8IZV2 173 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 PDZD8Q8NEN9 1154 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 CDC26Q8NHZ8 85 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 TMEM74Q96NL1 305 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 C17orf80Q9BSJ5 609 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 TSEN34Q9BSV6 310 aaKnown RBP11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 MEAF6Q9HAF1 191 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 FNIP2Q9P278 1114 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 NDUFAF1Q9Y375 327 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 H3BNC9 293 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 MTX2O75431 263 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 CLPTM1O96005 669 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 HNRNPCP07910 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 MTHFD1P11586 935 aaKnown RBP11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 UQCRBP14927 111 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 CSRP3P50461 194 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZXDBP98169 803 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 BCL2L1Q07817 233 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 NR6A1Q15406 480 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 AAK1Q2M2I8 961 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 SLC8B1Q6J4K2 584 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 FBXL19Q6PCT2 694 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 HERC6Q8IVU3 1022 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 BBS7Q8IWZ6 715 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 MYO1HQ8N1T3 1032 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 NAT16Q8N8M0 369 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 CLHC1Q8NHS4 586 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 ATOH8Q96SQ7 321 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 SEPHS2Q99611 448 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 TUBB1Q9H4B7 451 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 CAAP1Q9H8G2 361 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZFP14Q9HCL3 533 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 AP4S1Q9Y587 144 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 GREB1Q4ZG55 1949 aa11.43□□□□□ -0.58
ARHGEF1-220ENST00000600274 INPP4BO15327 924 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 S100BP04271 92 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZDHHC11BP0C7U3 371 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 LBPP18428 481 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 CAPN3P20807 821 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 TTPAP49638 278 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 LCP2Q13094 533 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 SLC5A9Q2M3M2 681 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZNF697Q5TEC3 545 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 CYHR1Q6ZMK1 362 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 SYVN1Q86TM6 617 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 TSPAN33Q86UF1 283 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 SERPINA9Q86WD7 417 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 KLHDC8BQ8IXV7 354 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 PCYOX1LQ8NBM8 494 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.42□□□□□ -0.589e-10■■■■■ 59.6
ARHGEF1-220ENST00000600274 FUBP1Q96AE4 644 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 MYO19Q96H55 970 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms