RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 OAS2P29728 719 aaKnown RBP12.37□□□□□ -0.43
TRIM28-212ENST00000597995 STAT5AP42229 794 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 SPINT3P49223 89 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 CLCNKAP51800 687 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 DSC2Q02487 901 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 SEPT6Q14141 434 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 IGFBP7Q16270 282 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 DEFB109BQ30KR1 87 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 HENMT1Q5T8I9 393 aaKnown RBP12.37□□□□□ -0.43
TRIM28-212ENST00000597995 UNC5BQ8IZJ1 945 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 TC2NQ8N9U0 490 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 STARD8Q92502 1023 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 ABHD17AQ96GS6 310 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 TSGA13Q96PP4 275 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 WDR24Q96S15 920 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 CARD9Q9H257 536 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 FAM83DQ9H4H8 585 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 UCK1Q9HA47 277 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 APMAPQ9HDC9 416 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 RBM22Q9NW64 420 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRIM28-212ENST00000597995 SIDT1Q9NXL6 827 aaKnown RBP12.37□□□□□ -0.43
TRIM28-212ENST00000597995 CPNE7Q9UBL6 633 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 KCNK6Q9Y257 313 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 PRKAB1Q9Y478 270 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 KCTD3Q9Y597 815 aa12.37□□□□□ -0.43
TRIM28-212ENST00000597995 MN1Q10571 1320 aaPredicted RBP12.37□□□□□ -0.43
TRIM28-212ENST00000597995 TOX3O15405 576 aaPredicted RBP12.36□□□□□ -0.43
TRIM28-212ENST00000597995 GRID2O43424 1007 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 NUAK1O60285 661 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 C9P02748 559 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 GP1BBP13224 206 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 ACP5P13686 325 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 CCNCP24863 283 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 NIPAL4Q0D2K0 466 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 KLRB1Q12918 225 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 TCEAL1Q15170 157 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 IFI16Q16666 785 aaKnown RBP12.36□□□□□ -0.43
TRIM28-212ENST00000597995 LACTB2Q53H82 288 aaPredicted RBP12.36□□□□□ -0.43
TRIM28-212ENST00000597995 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 PLD5Q8N7P1 536 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 ARRDC2Q8TBH0 407 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 CCHCR1Q8TD31 782 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 RNF157Q96PX1 679 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 PCDH9Q9HC56 1237 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 DTLQ9NZJ0 730 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 PKD2L2Q9NZM6 624 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 HYOU1Q9Y4L1 999 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 PCDHB3Q9Y5E6 796 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 RPS6KL1Q9Y6S9 549 aa12.36□□□□□ -0.43
TRIM28-212ENST00000597995 RELNP78509 3460 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 C1orf232A0A0U1RR37 186 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 PRR19A6NJB7 356 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 FADS2P1A8MWK0 482 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 GPR89AB7ZAQ6 455 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 SNX2O60749 519 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 HLA-DQB2P05538 268 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 TPM1P09493 284 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 GPR89BP0CG08 455 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 XRCC1P18887 633 aaPredicted RBP12.35□□□□□ -0.43
TRIM28-212ENST00000597995 ARHGAP25P42331 645 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 MAPK9P45984 424 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 UBE2IP63279 158 aaKnown RBP12.35□□□□□ -0.43
TRIM28-212ENST00000597995 C16orf46Q6P387 395 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 PHYKPLQ8IUZ5 450 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 MAP7D3Q8IWC1 876 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 FAM26EQ8N5C1 309 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 PLEKHG4BQ96PX9 1271 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 MLPHQ9BV36 600 aaPredicted RBP12.35□□□□□ -0.43
TRIM28-212ENST00000597995 TBC1D10AQ9BXI6 508 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 TRIM5Q9C035 493 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 RBSNQ9H1K0 784 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 KLHL3Q9UH77 587 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 LCMT1Q9UIC8 334 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 TFR2Q9UP52 801 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 KCNMB2Q9Y691 235 aa12.35□□□□□ -0.43
TRIM28-212ENST00000597995 LRRD1A4D1F6 860 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 ANKRD66B4E2M5 251 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 RECKO95980 971 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 CD97P48960 835 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 IL11RAQ14626 422 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 QPCTQ16769 361 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 SLC9A4Q6AI14 798 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 TCTN3Q6NUS6 607 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 C6orf15Q6UXA7 325 aaPredicted RBP12.34□□□□□ -0.43
TRIM28-212ENST00000597995 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 TMEM26Q6ZUK4 368 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 GAS2L3Q86XJ1 694 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 RHOT2Q8IXI1 618 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRIM28-212ENST00000597995 CNTD1Q8N815 330 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 LPCAT1Q8NF37 534 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 MIB2Q96AX9 1013 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 HDAC11Q96DB2 347 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 ADGRE3Q9BY15 652 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 ULBP3Q9BZM4 244 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 TRIM39Q9HCM9 518 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 PRDM8Q9NQV8 689 aa12.34□□□□□ -0.43
TRIM28-212ENST00000597995 OGFRQ9NZT2 677 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms