RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ADGRG6Q86SQ4 1221 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 MCUQ8NE86 351 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 ULK4Q96C45 1275 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 CDKN2AIPNLQ96HQ2 116 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 TRIM51Q9BSJ1 452 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 XAB2Q9HCS7 855 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 EVA1BQ9NVM1 165 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 RIMKLBQ9ULI2 386 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 CHD8Q9HCK8 2581 aa19.45■□□□□ 0.7
SHKBP1-214ENST00000597396 GPR89AB7ZAQ6 455 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 H7C0S8 307 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 GRID2O43424 1007 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 NUAK1O60285 661 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 KRT37O76014 449 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 CDK14O94921 469 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 GPR89BP0CG08 455 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 ZNF8P17098 575 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 CRADDP78560 199 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 TMEM115Q12893 351 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 ST3GAL2Q16842 350 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 C6orf132Q5T0Z8 1188 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 IZUMO3Q5VZ72 239 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 LVRNQ6Q4G3 990 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 SNX20Q7Z614 316 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 GLRX5Q86SX6 157 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 NAT8LQ8N9F0 302 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 DDHD1Q8NEL9 900 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 CCL4L1Q8NHW4 92 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 GLMNQ92990 594 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 APOLD1Q96LR9 279 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 FAM96AQ9H5X1 160 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 SYBUQ9NX95 663 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 GPR34Q9UPC5 381 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 PRKAB1Q9Y478 270 aa19.44■□□□□ 0.7
SHKBP1-214ENST00000597396 MLNP12872 115 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 MSH3P20585 1137 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 AK4P27144 223 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 PMLP29590 882 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 CA5AP35218 305 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 ARSDP51689 593 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 PRAMEP78395 509 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 CTBSQ01459 385 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 PROX2Q3B8N5 592 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 GPR33Q49SQ1 333 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 KHDC1Q4VXA5 237 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 CCDC157Q569K6 752 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 RNASEH2BQ5TBB1 312 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 SLC30A9Q6PML9 568 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 CRTC3Q6UUV7 619 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 CHST15Q7LFX5 561 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 TAS2R42Q7RTR8 314 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 LRRTM4Q86VH4 590 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 FAM46DQ8NEK8 389 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 GPBAR1Q8TDU6 330 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 PEX13Q92968 403 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 SIRPGQ9P1W8 387 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 SLC2A6Q9UGQ3 507 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 APOBEC2Q9Y235 224 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 PLEKHM1Q9Y4G2 1056 aa19.43■□□□□ 0.7
SHKBP1-214ENST00000597396 AVILO75366 819 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 CKMT2P17540 419 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 PSMA3P25788 255 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 ACTR1BP42025 376 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 DUSP3P51452 185 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 ACTR1AP61163 376 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 CACNG1Q06432 222 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 DNAJC3Q13217 504 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 LRP8Q14114 963 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 WHAMMP3Q1A5X7 153 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 CASC4Q6P4E1 433 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 AFTPHQ6ULP2 937 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 MAATS1Q7Z4T9 603 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 CAND1Q86VP6 1230 aaKnown RBP19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 TRAPPC5Q8IUR0 188 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 NXPE1Q8N323 547 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 FAM181AQ8N9Y4 354 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 OR13J1Q8NGT2 312 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 OR6P1Q8NGX9 317 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 KIF18AQ8NI77 898 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 HDAC10Q969S8 669 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 DCUN1D1Q96GG9 259 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 ZNF778Q96MU6 729 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 SERPINB12Q96P63 405 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 BOCQ9BWV1 1114 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 TRIM31Q9BZY9 425 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 CHRAC1Q9NRG0 131 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 NCKIPSDQ9NZQ3 722 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 SAMD15Q9P1V8 674 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 GULP1Q9UBP9 304 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 PCYT1BQ9Y5K3 369 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 MAP1BP46821 2468 aaKnown RBP19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 RP1P56715 2156 aa19.42■□□□□ 0.7
SHKBP1-214ENST00000597396 CCDC162PA2VCL2 907 aa19.41■□□□□ 0.7
SHKBP1-214ENST00000597396 FAM187AA6NFU0 413 aa19.41■□□□□ 0.7
SHKBP1-214ENST00000597396 EFCAB8A8MWE9 144 aa19.41■□□□□ 0.7
SHKBP1-214ENST00000597396 B4DGG1 531 aa19.41■□□□□ 0.7
SHKBP1-214ENST00000597396 CHUKO15111 745 aa19.41■□□□□ 0.7
SHKBP1-214ENST00000597396 KMOO15229 486 aa19.41■□□□□ 0.7
SHKBP1-214ENST00000597396 FTH1P19P0C7X4 201 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms