RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 KCTD3Q9Y597 815 aa11.99□□□□□ -0.49
SHKBP1-213ENST00000597325 FADS3Q9Y5Q0 445 aa11.99□□□□□ -0.49
SHKBP1-213ENST00000597325 AK5Q9Y6K8 562 aa11.99□□□□□ -0.49
SHKBP1-213ENST00000597325 FAM169AQ9Y6X4 670 aa11.99□□□□□ -0.49
SHKBP1-213ENST00000597325 A0A0U1RQS6 177 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 A0A1B0GTW7 788 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 LRRC72A6NJI9 287 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 SPINT1O43278 529 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 LZTS3O60299 673 aaPredicted RBP11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 ZNF217O75362 1048 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 VAPBO95292 243 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 CER1O95813 267 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 C1SP09871 688 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 C7P10643 843 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 SPAM1P38567 509 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 CCR10P46092 362 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 LIG3P49916 1009 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 ADPRHP54922 357 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 CLDN6P56747 220 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 GPX6P59796 221 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 IFFO1Q0D2I5 559 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 THOC5Q13769 683 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 FRG1Q14331 258 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 CDKN3Q16667 212 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 KLHL38Q2WGJ6 581 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 HLA-BQ31612 363 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 KIAA1161Q6NSJ0 714 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 ESRP1Q6NXG1 681 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 AFTPHQ6ULP2 937 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 LIPIQ6XZB0 460 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 KCNMB4Q86W47 210 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 OR13J1Q8NGT2 312 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 OR6P1Q8NGX9 317 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 FBF1Q8TES7 1133 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 SNRNP27Q8WVK2 155 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 DNASE2BQ8WZ79 361 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 CERS2Q96G23 380 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 ZNF778Q96MU6 729 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 C19orf43Q9BQ61 176 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 CCDC77Q9BR77 488 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 FAM167BQ9BTA0 163 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 BTBD1Q9H0C5 482 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 BPIFA1Q9NP55 256 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 IL17CQ9P0M4 197 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 USP36Q9P275 1121 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 SLC2A6Q9UGQ3 507 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 APPL1Q9UKG1 709 aa11.98□□□□□ -0.49
SHKBP1-213ENST00000597325 ZCWPW2A0A1B0GU75 182 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 TCRBV9S1A1TA0A576 114 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 RGSL1A5PLK6 1076 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 WNT9AO14904 365 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 IVLP07476 585 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 OXTRP30559 389 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 TAS2R38P59533 333 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 RPS21P63220 83 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 PTSQ03393 145 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 ACVR1Q04771 509 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 MGAT5Q09328 741 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 SLC29A2Q14542 456 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 PTPRCAPQ14761 206 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 ZNF284Q2VY69 593 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 ARHGAP40Q5TG30 622 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 ALS2CLQ60I27 953 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 ZNF449Q6P9G9 518 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 HDXQ7Z353 690 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 HSD11B1LQ7Z5J1 315 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 RAVER1Q8IY67 606 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 UHMK1Q8TAS1 419 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 CALML6Q8TD86 181 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 ANKRD7Q92527 254 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 FOXJ1Q92949 421 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 HDAC10Q969S8 669 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 FAM131CQ96AQ9 280 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 NUS1Q96E22 293 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 PLEKHG4BQ96PX9 1271 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 RUFY1Q96T51 708 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 CYTH2Q99418 400 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 C1QTNF7Q9BXJ2 289 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 CDH19Q9H159 772 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 KDM4CQ9H3R0 1056 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 SGK2Q9HBY8 427 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 CPNE5Q9HCH3 593 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 CD93Q9NPY3 652 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 ITM2CQ9NQX7 267 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 KCTD5Q9NXV2 234 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 ZFATQ9P243 1243 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 TXNDC16Q9P2K2 825 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 FKBPLQ9UIM3 349 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 CYP8B1Q9UNU6 501 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 SLC30A1Q9Y6M5 507 aa11.97□□□□□ -0.49
SHKBP1-213ENST00000597325 SCN8AQ9UQD0 1980 aa11.96□□□□□ -0.49
SHKBP1-213ENST00000597325 ZNF106Q9H2Y7 1883 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-213ENST00000597325 TBC1D3DA0A087WVF3 549 aa11.96□□□□□ -0.49
SHKBP1-213ENST00000597325 TBC1D3IA0A087WXS9 549 aa11.96□□□□□ -0.49
SHKBP1-213ENST00000597325 TBC1D3EA0A087X179 549 aa11.96□□□□□ -0.49
SHKBP1-213ENST00000597325 TBC1D3KA0A087X1G2 549 aa11.96□□□□□ -0.49
SHKBP1-213ENST00000597325 GLYATL1P3A0A0U1RQE8 302 aa11.96□□□□□ -0.49
SHKBP1-213ENST00000597325 EXOC1LA0A1B0GW35 172 aa11.96□□□□□ -0.49
SHKBP1-213ENST00000597325 CCDC162PA2VCL2 907 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms