RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 SGF29Q96ES7 293 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 PDXPQ96GD0 296 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 COPS8Q99627 209 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 BOCQ9BWV1 1114 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 TEX101Q9BY14 249 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 SLC13A1Q9BZW2 595 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 ANKZF1Q9H8Y5 726 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 MRM3Q9HC36 420 aaKnown RBP9.21□□□□□ -0.94
ZNF548-206ENST00000597047 TRIM39Q9HCM9 518 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 PARD6AQ9NPB6 346 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 FBXO6Q9NRD1 293 aaPredicted RBP9.21□□□□□ -0.94
ZNF548-206ENST00000597047 TREX1Q9NSU2 369 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 ZDHHC18Q9NUE0 388 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 MARCH4Q9P2E8 410 aaPredicted RBP9.21□□□□□ -0.94
ZNF548-206ENST00000597047 SLC17A6Q9P2U8 582 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 ATXN10Q9UBB4 475 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 TMPRSS11EQ9UL52 423 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 SUFUQ9UMX1 484 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 DNAJC16Q9Y2G8 782 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 TEX264Q9Y6I9 313 aa9.21□□□□□ -0.94
ZNF548-206ENST00000597047 TRBV23OR9-2A0A075B6M9 112 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 SPTY2D1-AS1A0A0U1RR47 76 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 PRSS38A1L453 326 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CFAP99D6REC4 459 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 EIF3HO15372 352 aaKnown RBP eCLIP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 FFAR2O15552 330 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 GRID2O43424 1007 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 OR1I1O60431 355 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 GFRA3O60609 400 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 SNX2O60749 519 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 PIAS1O75925 651 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ACSL3O95573 720 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 TTC4O95801 387 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CER1O95813 267 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CEACAM5P06731 702 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 FAM153BP0C7A2 387 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ZNF806P0C7X5 589 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ACP5P13686 325 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 SAT1P21673 171 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 FMO4P31512 558 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 PPARGP37231 505 aaPredicted RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CTSKP43235 329 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ABCG1P45844 678 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ARRB1P49407 418 aaPredicted RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CSE1LP55060 971 aaKnown RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 TUBB4BP68371 445 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 UAP1Q16222 522 aaPredicted RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 DBN1Q16643 649 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 INSCQ1MX18 579 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ALG11Q2TAA5 492 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 FAM153CQ494X1 144 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 GPR33Q49SQ1 333 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 KHDC1Q4VXA5 237 aaKnown RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 PRRT3Q5FWE3 981 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 PLA2G2CQ5R387 149 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ZNF470Q6ECI4 717 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 PTRHD1Q6GMV3 140 aaKnown RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 KIAA0930Q6ICG6 404 aaPredicted RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 MRNIPQ6NTE8 343 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CEP128Q6ZU80 1094 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 C3orf62Q6ZUJ4 267 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 TAF8Q7Z7C8 310 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 IQCHQ86VS3 1027 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 NLRP8Q86W28 1048 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 PARGQ86W56 976 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 GALNT13Q8IUC8 556 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CCNJLQ8IV13 435 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 DENND6AQ8IWF6 608 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CTAGE3PQ8IX95 158 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 RAVER1Q8IY67 606 aaKnown RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 PHACTR4Q8IZ21 702 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 NXPE1Q8N323 547 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 BEND7Q8N7W2 519 aaPredicted RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 RASGEF1AQ8N9B8 481 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 SETD7Q8WTS6 366 aaKnown RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 FAM136AQ96C01 138 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 LRRC39Q96DD0 335 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ATXN7L3BQ96GX2 97 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ELF4Q99607 663 aaPredicted RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 WDR83Q9BRX9 315 aaKnown RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 NAT9Q9BTE0 207 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 EDEM2Q9BV94 578 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 FOXP3Q9BZS1 431 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 OSGEPL1Q9H4B0 414 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CAPN10Q9HC96 672 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 FGF22Q9HCT0 170 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 SARS2Q9NP81 518 aaKnown RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 TM7SF3Q9NS93 570 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 RXFP3Q9NSD7 469 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ZDHHC3Q9NYG2 299 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 APOBEC3BQ9UH17 382 aaKnown RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 TSR3Q9UJK0 312 aaKnown RBP9.2□□□□□ -0.94
ZNF548-206ENST00000597047 RIMKLBQ9ULI2 386 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 CRYL1Q9Y2S2 319 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 PLXNB3Q9ULL4 1909 aa9.2□□□□□ -0.94
ZNF548-206ENST00000597047 ZCWPW2A0A1B0GU75 182 aa9.19□□□□□ -0.94
ZNF548-206ENST00000597047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.19□□□□□ -0.94
ZNF548-206ENST00000597047 C4orf47A7E2U8 309 aa9.19□□□□□ -0.94
ZNF548-206ENST00000597047 C10orf142B7Z368 130 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms