RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 CCDC97Q96F63 343 aaPredicted RBP14.52□□□□□ -0.09
VRK3-212ENST00000596814 TOE1Q96GM8 510 aaKnown RBP14.52□□□□□ -0.09
VRK3-212ENST00000596814 BIRC8Q96P09 236 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 P2RY12Q9H244 342 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 GNPTGQ9UJJ9 305 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 COMMD10Q9Y6G5 202 aa14.52□□□□□ -0.09
VRK3-212ENST00000596814 PIKFYVEQ9Y2I7 2098 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 IGHV1OR15-9A0A0B4J2B8 117 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 TMEM221A6NGB7 291 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 CFAP99D6REC4 459 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 M0R296 226 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 INPP4BO15327 924 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 SLC25A14O95258 325 aaPredicted RBP14.51□□□□□ -0.09
VRK3-212ENST00000596814 RALBP11234 206 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 CREB1P16220 341 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 STMN1P16949 149 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 CCNFP41002 786 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 PXNP49023 591 aaPredicted RBP14.51□□□□□ -0.09
VRK3-212ENST00000596814 TAS2R39P59534 338 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 ZKSCAN8Q15776 578 aaPredicted RBP14.51□□□□□ -0.09
VRK3-212ENST00000596814 CTSL3PQ5NE16 218 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 PNCKQ6P2M8 343 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 ADAMTSL4Q6UY14 1074 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 MAMSTRQ6ZN01 415 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 RAPH1Q70E73 1250 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 PLA2G15Q8NCC3 412 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 HEXDCQ8WVB3 486 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 TSPAN17Q96FV3 270 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 DCUN1D1Q96GG9 259 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 OLFM1Q99784 485 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 PCMTD2Q9NV79 361 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 SPATA6Q9NWH7 488 aaPredicted RBP14.51□□□□□ -0.09
VRK3-212ENST00000596814 WSB2Q9NYS7 404 aaPredicted RBP14.51□□□□□ -0.09
VRK3-212ENST00000596814 VWA7Q9Y334 891 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 PLXND1Q9Y4D7 1925 aa14.51□□□□□ -0.09
VRK3-212ENST00000596814 K7ESF4 209 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 SLC31A1O15431 190 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 MTX2O75431 263 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 RHOBTB1O94844 696 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 BRAFP15056 766 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 NR1D1P20393 614 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 MSH3P20585 1137 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 FDXRP22570 491 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 CDKN2DP55273 166 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 RAB10P61026 200 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 B4GALNT1Q00973 533 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 TAF1BQ53T94 588 aaPredicted RBP14.5□□□□□ -0.09
VRK3-212ENST00000596814 PTRHD1Q6GMV3 140 aaKnown RBP14.5□□□□□ -0.09
VRK3-212ENST00000596814 DENND6BQ8NEG7 585 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 RLN3Q8WXF3 142 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 ALKBH8Q96BT7 664 aaKnown RBP14.5□□□□□ -0.09
VRK3-212ENST00000596814 CABS1Q96KC9 395 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 MBNL1Q9NR56 388 aaKnown RBP14.5□□□□□ -0.09
VRK3-212ENST00000596814 CNOT6Q9ULM6 557 aaKnown RBP14.5□□□□□ -0.09
VRK3-212ENST00000596814 PRSS21Q9Y6M0 314 aa14.5□□□□□ -0.09
VRK3-212ENST00000596814 H3BMM5 538 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 PHGDHO43175 533 aaKnown RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 NIPSNAP2O75323 286 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 MPOP05164 745 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 TEAD1P28347 426 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 CRABP2P29373 138 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 SLC18A2Q05940 514 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 ZNF460Q14592 562 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 KHDC1Q4VXA5 237 aaKnown RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 KIAA0895LQ68EN5 471 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 SH2D5Q6ZV89 423 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 HEATR4Q86WZ0 1026 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 CEP97Q8IW35 865 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 KRT222Q8N1A0 295 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 KCNJ9Q92806 393 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 CENPTQ96BT3 561 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 APOPT1Q96IL0 206 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 HIC2Q96JB3 615 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 LENG8Q96PV6 779 aaPredicted RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 SELENOSQ9BQE4 189 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 GPR174Q9BXC1 333 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 ZCCHC2Q9C0B9 1178 aaKnown RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 VPS11Q9H270 941 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 C6orf106Q9H6K1 298 aaPredicted RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 SSU72Q9NP77 194 aaKnown RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 FZD3Q9NPG1 666 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 TAS2R13Q9NYV9 303 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 BDP1A6H8Y1 2624 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 A0A096LPK6 155 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 C10orf142B7Z368 130 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 E5RI56 91 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 AXIN1O15169 862 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 RAD51BO15315 384 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 LATO43561 262 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 SPAG7O75391 227 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 VPS26AO75436 327 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 C2P06681 752 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 ATP1B2P14415 290 aaPredicted RBP14.49□□□□□ -0.09
VRK3-212ENST00000596814 IGFALSP35858 605 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 CSRP3P50461 194 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 CCR5P51681 352 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 PGGT1BP53609 377 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 PPP2R2AP63151 447 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 CDK3Q00526 305 aa14.49□□□□□ -0.09
VRK3-212ENST00000596814 PDE1CQ14123 709 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms