RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 KCNK6Q9Y257 313 aa11.02□□□□□ -0.65
VRK3-210ENST00000596121 PKP3Q9Y446 797 aa11.02□□□□□ -0.65
VRK3-210ENST00000596121 RNF215Q9Y6U7 377 aa11.02□□□□□ -0.65
VRK3-210ENST00000596121 MAP1BP46821 2468 aaKnown RBP11.02□□□□□ -0.65
VRK3-210ENST00000596121 COL27A1Q8IZC6 1860 aaPredicted RBP11.02□□□□□ -0.65
VRK3-210ENST00000596121 A6NCN8 305 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 ERI2A8K979 691 aaKnown RBP11.01□□□□□ -0.65
VRK3-210ENST00000596121 AGAP14A8MT82 685 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 PGRMC1O00264 195 aaKnown RBP11.01□□□□□ -0.65
VRK3-210ENST00000596121 SGTAO43765 313 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 PPFIA2O75334 1257 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 SRP72O76094 671 aaKnown RBP11.01□□□□□ -0.65
VRK3-210ENST00000596121 CRTAMO95727 393 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 APRTP07741 180 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 ACP5P13686 325 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 PSMA3P25788 255 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 ACTR1BP42025 376 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 DUSP3P51452 185 aaPredicted RBP11.01□□□□□ -0.65
VRK3-210ENST00000596121 CTSCP53634 463 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 TERF1P54274 439 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 ACTR1AP61163 376 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 B4GALNT1Q00973 533 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 E2F1Q01094 437 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 TMEM115Q12893 351 aaPredicted RBP11.01□□□□□ -0.65
VRK3-210ENST00000596121 PLA2G4EQ3MJ16 856 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 C14orf28Q4W4Y0 310 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 PAPD7Q5XG87 772 aaKnown RBP11.01□□□□□ -0.65
VRK3-210ENST00000596121 CRTC3Q6UUV7 619 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 XKR5Q6UX68 686 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 ZNF534Q76KX8 674 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 GSTA5Q7RTV2 222 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 CREG2Q8IUH2 290 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 PHYKPLQ8IUZ5 450 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 ARL14Q8N4G2 192 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 DDHD1Q8NEL9 900 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 MAPK15Q8TD08 544 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 ZDHHC1Q8WTX9 485 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 ZNF778Q96MU6 729 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 CCDC3Q9BQI4 270 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 RMI1Q9H9A7 625 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 NLE1Q9NVX2 485 aaPredicted RBP11.01□□□□□ -0.65
VRK3-210ENST00000596121 SCHIP1Q9P0W5 487 aaPredicted RBP11.01□□□□□ -0.65
VRK3-210ENST00000596121 TBC1D29Q9UFV1 150 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 SLC2A6Q9UGQ3 507 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 FREM2Q5SZK8 3169 aa11.01□□□□□ -0.65
VRK3-210ENST00000596121 EPG5Q9HCE0 2579 aa11□□□□□ -0.65
VRK3-210ENST00000596121 A0A1W2PNU3 283 aaPredicted RBP11□□□□□ -0.65
VRK3-210ENST00000596121 A0A1W2PQM1 296 aa11□□□□□ -0.65
VRK3-210ENST00000596121 CES2O00748 559 aa11□□□□□ -0.65
VRK3-210ENST00000596121 PPM1DO15297 605 aa11□□□□□ -0.65
VRK3-210ENST00000596121 B4GAT1O43505 415 aa11□□□□□ -0.65
VRK3-210ENST00000596121 VEGFDO43915 354 aa11□□□□□ -0.65
VRK3-210ENST00000596121 CDK14O94921 469 aa11□□□□□ -0.65
VRK3-210ENST00000596121 PRAMEF1O95521 474 aa11□□□□□ -0.65
VRK3-210ENST00000596121 MT-CO3P00414 261 aa11□□□□□ -0.65
VRK3-210ENST00000596121 KRT14P02533 472 aa11□□□□□ -0.65
VRK3-210ENST00000596121 JUPP14923 745 aa11□□□□□ -0.65
VRK3-210ENST00000596121 ZNF7P17097 686 aaPredicted RBP11□□□□□ -0.65
VRK3-210ENST00000596121 RPIAP49247 311 aa11□□□□□ -0.65
VRK3-210ENST00000596121 VPS41P49754 854 aa11□□□□□ -0.65
VRK3-210ENST00000596121 CCL7P80098 99 aa11□□□□□ -0.65
VRK3-210ENST00000596121 NFATC2Q13469 925 aa11□□□□□ -0.65
VRK3-210ENST00000596121 SEPT6Q14141 434 aa11□□□□□ -0.65
VRK3-210ENST00000596121 ANKRD22Q5VYY1 191 aa11□□□□□ -0.65
VRK3-210ENST00000596121 ZDHHC20Q5W0Z9 365 aa11□□□□□ -0.65
VRK3-210ENST00000596121 LINC00523Q86TU6 105 aa11□□□□□ -0.65
VRK3-210ENST00000596121 PIANPQ8IYJ0 282 aa11□□□□□ -0.65
VRK3-210ENST00000596121 DCBLD1Q8N8Z6 715 aa11□□□□□ -0.65
VRK3-210ENST00000596121 Q8N9G6 341 aaPredicted RBP11□□□□□ -0.65
VRK3-210ENST00000596121 GLMNQ92990 594 aa11□□□□□ -0.65
VRK3-210ENST00000596121 CDKN2AIPNLQ96HQ2 116 aa11□□□□□ -0.65
VRK3-210ENST00000596121 ASB8Q9H765 288 aa11□□□□□ -0.65
VRK3-210ENST00000596121 PRDM8Q9NQV8 689 aa11□□□□□ -0.65
VRK3-210ENST00000596121 KCND1Q9NSA2 647 aa11□□□□□ -0.65
VRK3-210ENST00000596121 HOMER3Q9NSC5 361 aa11□□□□□ -0.65
VRK3-210ENST00000596121 KLC4Q9NSK0 619 aa11□□□□□ -0.65
VRK3-210ENST00000596121 SMOXQ9NWM0 555 aa11□□□□□ -0.65
VRK3-210ENST00000596121 NCKIPSDQ9NZQ3 722 aa11□□□□□ -0.65
VRK3-210ENST00000596121 LRIT1Q9P2V4 623 aa11□□□□□ -0.65
VRK3-210ENST00000596121 PCDHB1Q9Y5F3 818 aa11□□□□□ -0.65
VRK3-210ENST00000596121 TRBV5-4A0A0C4DH59 114 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 PRAMEF33A0A0G2JMD5 474 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 CCDC162PA2VCL2 907 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 TRABD2BA6NFA1 517 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 OR51F1A6NGY5 319 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 E7EVH7 732 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 H7C0S8 307 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 NTN3O00634 580 aaPredicted RBP10.99□□□□□ -0.65
VRK3-210ENST00000596121 CDK4P11802 303 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 GLB1P16278 677 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 MC4RP32245 332 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 ACTN2P35609 894 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 LMAN1P49257 510 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 CLCNKAP51800 687 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 PDX1P52945 283 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 OR1D5P58170 312 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 CRADDP78560 199 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 BASP1P80723 227 aaKnown RBP10.99□□□□□ -0.65
VRK3-210ENST00000596121 CDH17Q12864 832 aa10.99□□□□□ -0.65
VRK3-210ENST00000596121 GPS1Q13098 491 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms