RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 NCBP2-AS2Q69YL0 99 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 APLFQ8IW19 511 aaPredicted RBP9.83□□□□□ -0.84
LIG1-209ENST00000596104 EID2BQ96D98 161 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 TGM7Q96PF1 710 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 TSGA13Q96PP4 275 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 OR6C1Q96RD1 312 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 LRRC4CQ9HCJ2 640 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 ARFGAP3Q9NP61 516 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
LIG1-209ENST00000596104 ANO10Q9NW15 660 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 RBM22Q9NW64 420 aaKnown RBP eCLIP9.83□□□□□ -0.84
LIG1-209ENST00000596104 DTLQ9NZJ0 730 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 PKD2L2Q9NZM6 624 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 SLC23A2Q9UGH3 650 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 TLK1Q9UKI8 766 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 PCDHGA6Q9Y5G7 932 aa9.83□□□□□ -0.84
LIG1-209ENST00000596104 ANKRD66B4E2M5 251 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 CHUKO15111 745 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 KIF1CO43896 1103 aaKnown RBP9.82□□□□□ -0.84
LIG1-209ENST00000596104 KATNA1O75449 491 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 SPAG6O75602 509 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 CREG1O75629 220 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 TIAF1O95411 115 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 MMP2P08253 660 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 BRAFP15056 766 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 CA4P22748 312 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 CCNCP24863 283 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 KLHL30Q0D2K2 578 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 DNASE1L3Q13609 305 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 KRT81Q14533 505 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 STX1AQ16623 288 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 CAPRIN2Q6IMN6 1127 aaKnown RBP9.82□□□□□ -0.84
LIG1-209ENST00000596104 TIGD7Q6NT04 549 aaPredicted RBP9.82□□□□□ -0.84
LIG1-209ENST00000596104 ABRAXAS1Q6UWZ7 409 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 CLEC17AQ6ZS10 378 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 PRSS42Q7Z5A4 293 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 ADGRG6Q86SQ4 1221 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 KLHL6Q8WZ60 621 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 RSC1A1Q92681 617 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 STAMBPL1Q96FJ0 436 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 ELMO2Q96JJ3 720 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 BTBD6Q96KE9 485 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 OR2AG1Q9H205 316 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 OSGEPL1Q9H4B0 414 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 TRIM39Q9HCM9 518 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 KLC4Q9NSK0 619 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 SEMA5BQ9P283 1151 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 NFKBIL1Q9UBC1 381 aaPredicted RBP9.82□□□□□ -0.84
LIG1-209ENST00000596104 EPHA6Q9UF33 1036 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 KCND3Q9UK17 655 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 TTLL3Q9Y4R7 772 aa9.82□□□□□ -0.84
LIG1-209ENST00000596104 SPTBN1Q01082 2364 aaKnown RBP9.81□□□□□ -0.84
LIG1-209ENST00000596104 CDC14CA4D256 554 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 GPR89AB7ZAQ6 455 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 RASSF9O75901 435 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 DNAJB5O75953 348 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 SLC25A14O95258 325 aaPredicted RBP9.81□□□□□ -0.84
LIG1-209ENST00000596104 VIPP01282 170 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 GPR89BP0CG08 455 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 SKILP12757 684 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 AMD1P17707 334 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 GNLYP22749 145 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 CAPZBP47756 277 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 DCDC1P59894 354 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 SEMA5AQ13591 1074 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 DPYSL3Q14195 570 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 IFI16Q16666 785 aaKnown RBP9.81□□□□□ -0.84
LIG1-209ENST00000596104 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.81□□□□□ -0.84
LIG1-209ENST00000596104 ATP13A4Q4VNC1 1196 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 ZNF569Q5MCW4 686 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 CCDC122Q5T0U0 273 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 CCDC183Q5T5S1 534 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 CRTC3Q6UUV7 619 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 SASS6Q6UVJ0 657 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 WASH2PQ6VEQ5 465 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 RASGRP3Q8IV61 690 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 ZNF547Q8IVP9 402 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 CNTD1Q8N815 330 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 GALNT11Q8NCW6 608 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 GPR26Q8NDV2 337 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 CCHCR1Q8TD31 782 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 CT55Q8WUE5 264 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 LRRN4Q8WUT4 740 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 MLPHQ9BV36 600 aaPredicted RBP9.81□□□□□ -0.84
LIG1-209ENST00000596104 TRIM55Q9BYV6 548 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 TWSG1Q9GZX9 223 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 BRD8Q9H0E9 1235 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 THAP2Q9H0W7 228 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 SLC40A1Q9NP59 571 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 LHX9Q9NQ69 397 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 WASH6PQ9NQA3 447 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 POT1Q9NUX5 634 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 PLEKHB1Q9UF11 243 aaPredicted RBP9.81□□□□□ -0.84
LIG1-209ENST00000596104 IP6K2Q9UHH9 426 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 LNPEPQ9UIQ6 1025 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 ANAPC7Q9UJX3 599 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 PADI1Q9ULC6 663 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 GTF3C3Q9Y5Q9 886 aa9.81□□□□□ -0.84
LIG1-209ENST00000596104 MYO9AB2RTY4 2548 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 PIPSLA2A3N6 862 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms