RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	ENTPD4	Q9Y227	616 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SLC30A1	Q9Y6M5	507 aa		13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	DIDO1	Q9BTC0	2240 aa	Known RBP	13.58	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ANKRD62	A6NC57	917 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	GOLGA6L3	A6NEY3	463 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CEACAM4	O75871	244 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	GYPC	P04921	128 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	GZMA	P12544	262 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SKIL	P12757	684 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	VARS	P26640	1264 aa	Known RBP	13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TEAD1	P28347	426 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	OGDH	Q02218	1023 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CDK18	Q07002	472 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LAMB3	Q13751	1172 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LRP8	Q14114	963 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TMCO4	Q5TGY1	634 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	FAM69B	Q5VUD6	431 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	HGSNAT	Q68CP4	663 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PLEKHA7	Q6IQ23	1121 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PWWP2B	Q6NUJ5	590 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	DCUN1D2	Q6PH85	259 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ADAMTSL4	Q6UY14	1074 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TECPR1	Q7Z6L1	1165 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CNPY3	Q9BT09	278 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	STN1	Q9H668	368 aa	Known RBP	13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CATSPERB	Q9H7T0	1116 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ITGB1BP2	Q9UKP3	347 aa		13.57	□□□□□ -0.24
SHKBP1-208	ENST00000595726	POLE	Q07864	2286 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726		F5H423	210 aa	Predicted RBP	13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CP	P00450	1065 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ACP5	P13686	325 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CTPS1	P17812	591 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ITGA1	P56199	1179 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ZBED6	P86452	979 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	DPT	Q07507	201 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	MAMLD1	Q13495	774 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TDRD12	Q587J7	1177 aa	Known RBP	13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PPP1R3B	Q86XI6	285 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	RHOT1	Q8IXI2	618 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SYN2	Q92777	582 aa	Predicted RBP	13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	AP2M1	Q96CW1	435 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	IQCD	Q96DY2	449 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PLEKHG4B	Q96PX9	1271 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	GPR87	Q9BY21	358 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	XPO4	Q9C0E2	1151 aa	Known RBP	13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TSPY26P	Q9H489	355 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PARVA	Q9NVD7	372 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	KCTD5	Q9NXV2	234 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	FZD10	Q9ULW2	581 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CAPN11	Q9UMQ6	739 aa		13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	FARSA	Q9Y285	508 aa	Known RBP	13.56	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LRRTM2	O43300	516 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	HTRA2	O43464	458 aa	Predicted RBP	13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	DNAJC6	O75061	913 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	UBXN7	O94888	489 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	FTL	P02792	175 aa	Predicted RBP	13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	MT-ND3	P03897	115 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	F3	P13726	295 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	AMD1	P17707	334 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	RPS15	P62841	145 aa	Known RBP	13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SLC10A7	Q0GE19	358 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ELOA	Q14241	798 aa	Known RBP	13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	KCNAB1	Q14722	419 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	NFKBIB	Q15653	356 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CACHD1	Q5VU97	1274 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	FAM92B	Q6ZTR7	304 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SYVN1	Q86TM6	617 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	IQCK	Q8N0W5	287 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LZTR1	Q8N653	840 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	CPLX3	Q8WVH0	158 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ZNF653	Q96CK0	615 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	COX14	Q96I36	57 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ISCU	Q9H1K1	167 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	EPB41L1	Q9H4G0	881 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	GPATCH2L	Q9NWQ4	482 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	NTNG1	Q9Y2I2	539 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PCDHGB7	Q9Y5F8	929 aa		13.55	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ARHGAP42	A6NI28	874 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	LILRA5	A6NI73	299 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	DFFA	O00273	331 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ZG16	O60844	167 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SERPING1	P05155	500 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TPM3	P06753	285 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	FOLR1	P15328	257 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	PSMA2	P25787	234 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	AIF1	P55008	147 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	AP1S1	P61966	158 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	UBE2I	P63279	158 aa	Known RBP	13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TRAF2	Q12933	501 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	KRTAP21-3	Q3LHN1	58 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	ARHGAP12	Q8IWW6	846 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	KLHL6	Q8WZ60	621 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SEC14L1	Q92503	715 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	RSC1A1	Q92681	617 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	TRIM11	Q96F44	468 aa		13.54	□□□□□ -0.24
SHKBP1-208	ENST00000595726	SCRN2	Q96FV2	425 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms