RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZMIZ1Q9ULJ6 1067 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 ZNF148Q9UQR1 794 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 KCNK6Q9Y257 313 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 FAM208BQ5VWN6 2430 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 C2orf81A6NN90 581 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 USP27XA6NNY8 438 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 CCL22O00626 93 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 STX7O15400 261 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 GRID2O43424 1007 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 NUDT21O43809 227 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 CEP104O60308 925 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 PPFIA2O75334 1257 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 TCEA3O75764 348 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 IFNB1P01574 187 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 RPLP0P05388 317 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 ZSCAN5DPP0CG00 497 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 PNLIPP16233 465 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 TPH1P17752 444 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 GRIA1P42261 906 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 CCL7P80098 99 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 CYP4F3Q08477 520 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 PEX6Q13608 980 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 RTP5Q14D33 572 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 ISXQ2M1V0 245 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 PLA2G4EQ3MJ16 856 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 ZDHHC20Q5W0Z9 365 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 CRTC3Q6UUV7 619 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 TMPRSS9Q7Z410 1059 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 SPRED1Q7Z699 444 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 PROSER1Q86XN7 944 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 SLC35F6Q8N357 371 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 ARL14Q8N4G2 192 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 PRELID2Q8N945 189 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 DDHD1Q8NEL9 900 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 CCDC97Q96F63 343 aaPredicted RBP10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 ETNK1Q9HBU6 452 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 SMOXQ9NWM0 555 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 LRIT1Q9P2V4 623 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 DKK4Q9UBT3 224 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 ZKSCAN5Q9Y2L8 839 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 PKP3Q9Y446 797 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 JRKLQ9Y4A0 524 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 ENTPD2Q9Y5L3 495 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 MGAQ8IWI9 3026 aa10.85□□□□□ -0.67
SHKBP1-206ENST00000595523 ADAMTS20P59510 1910 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 PMS2P1A4D2B8 440 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 AGAP14A8MT82 685 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 GPR89AB7ZAQ6 455 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 D6RAR5 112 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 PPM1DO15297 605 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 B4GAT1O43505 415 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 VEGFDO43915 354 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 SRP72O76094 671 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 SUN1O94901 812 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 PRAMEF1O95521 474 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 GPR89BP0CG08 455 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 RPL22P35268 128 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 FDFT1P37268 417 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 KCNJ1P48048 391 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 CTSCP53634 463 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 B4GALNT1Q00973 533 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 TMEM115Q12893 351 aaPredicted RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 SEMA5AQ13591 1074 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 POU6F1Q14863 301 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 NR1D2Q14995 579 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 LONRF2Q1L5Z9 754 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 GPRC6AQ5T6X5 926 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 TTC27Q6P3X3 843 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 RBM44Q6ZP01 1051 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 B3GNT8Q7Z7M8 397 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 CCNJLQ8IV13 435 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 RASGEF1CQ8N431 466 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 SFRP1Q8N474 314 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 RASGEF1AQ8N9B8 481 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 Q8N9G6 341 aaPredicted RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 OR6C4Q8NGE1 309 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 OR52K1Q8NGK4 314 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 SLC37A2Q8TED4 501 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 NAT14Q8WUY8 206 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 NXPE2Q96DL1 559 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 ATXN7L3BQ96GX2 97 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 MS4A14Q96JA4 679 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 DNAJC1Q96KC8 554 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 DEPDC7Q96QD5 511 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 NRSN2Q9GZP1 204 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 LRRN3Q9H3W5 708 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 CCDC86Q9H6F5 360 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 SYNDIG1Q9H7V2 258 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 TRMT1Q9NXH9 659 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 SMARCAL1Q9NZC9 954 aa10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 FEZ2Q9UHY8 353 aaPredicted RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 ATXN7L1Q9ULK2 861 aaPredicted RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 DRG1Q9Y295 367 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-206ENST00000595523 TRBV23OR9-2A0A075B6M9 112 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 SRRM3A6NNA2 597 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 ERI2A8K979 691 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 KMOO15229 486 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 PSMD3O43242 534 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 ZSCAN12O43309 604 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 CDK14O94921 469 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms