RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CLK4Q9HAZ1 481 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 PTBP2Q9UKA9 531 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 B3GNT3Q9Y2A9 372 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 FNDC3AQ9Y2H6 1198 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 PDE4DIPQ5VU43 2346 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 CHD5Q8TDI0 1954 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 CDH23Q9H251 3354 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 GOLGA8QA0A0J9YX86 632 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 A0A1B0GTW7 788 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 GOLGA8OA6NCC3 632 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 ZBBXA8MT70 800 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 GOLGA8NF8WBI6 632 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 PSMD12O00232 456 aaPredicted RBP16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 TGM5O43548 720 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 KLHL41O60662 606 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 SULT1C4O75897 302 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 FGF18O76093 207 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 CNPP09543 421 aaKnown RBP16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 TTKP33981 857 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 RFTN1Q14699 578 aaPredicted RBP16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 MOGQ16653 247 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 OR4L1Q8NH43 312 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 STARD8Q92502 1023 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 TMA16Q96EY4 203 aaKnown RBP16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 TSPAN17Q96FV3 270 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 POMKQ9H5K3 350 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 IL21Q9HBE4 155 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 OLAHQ9NV23 265 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 RAI2Q9Y5P3 530 aa16.96■□□□□ 0.3
SHKBP1-205ENST00000594973 A0A0U1RQS6 177 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 NEMP1O14524 444 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 OXSR1O95747 527 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 CD160O95971 181 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 PRLP01236 227 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 CKMP06732 381 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 DNAJB1P25685 340 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 EIF2B2P49770 351 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 PLK1P53350 603 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 ACVR1Q04771 509 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 KLF10Q13118 480 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 CDH18Q13634 790 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 AGAP9Q5VTM2 703 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 NANOGP8Q6NSW7 305 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 MRNIPQ6NTE8 343 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 EPGNQ6UW88 154 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 TMEM207Q6UWW9 146 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 ITIH5Q86UX2 942 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 MDGA1Q8NFP4 955 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 OR4K2Q8NGD2 314 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 TBC1D15Q8TC07 691 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 WFDC5Q8TCV5 224 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 DOK1Q99704 481 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 CAAP1Q9H8G2 361 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 CATSPERZQ9NTU4 200 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 TRNAU1APQ9NX07 287 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 EBF1Q9UH73 591 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 ZDHHC2Q9UIJ5 367 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 RAP2CQ9Y3L5 183 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 A0A087WXM4 84 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 LTA4HP09960 611 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 GJA1P17302 382 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 RPL14P50914 215 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 KPNA2P52292 529 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 PIGGQ5H8A4 983 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 ZNF549Q6P9A3 640 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 C16orf87Q6PH81 154 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 BNC2Q6ZN30 1099 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 GAREM2Q75VX8 874 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 HS6ST3Q8IZP7 471 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 EFHBQ8N7U6 833 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 CDKN2AIPNLQ96HQ2 116 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 OR52B2Q96RD2 323 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 FEM1AQ9BSK4 669 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 ZBED2Q9BTP6 218 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 WDR55Q9H6Y2 383 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 GID8Q9NWU2 228 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 UTP6Q9NYH9 597 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 CHD7Q9P2D1 2997 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 STOML2Q9UJZ1 356 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 FCF1Q9Y324 198 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 AP4S1Q9Y587 144 aa16.95■□□□□ 0.3
SHKBP1-205ENST00000594973 TYW5A2RUC4 315 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 GREM1O60565 184 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 KCNA5P22460 613 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 KRT80Q6KB66 452 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 GALNT7Q86SF2 657 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 LSMEM2Q8N112 164 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 PHTF2Q8N3S3 785 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 ARL10Q8N8L6 244 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 KYQ8NBH2 561 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 HGH1Q9BTY7 390 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 ATAD3AQ9NVI7 634 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 ANAPC1Q9H1A4 1944 aa16.94■□□□□ 0.3
SHKBP1-205ENST00000594973 LSM1O15116 133 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 DCXO43602 365 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 BCAS2O75934 225 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 MT-CO1P00395 513 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 HNRNPLP14866 589 aaKnown RBP eCLIP16.93■□□□□ 0.31e-11■■■■□ 20.2
SHKBP1-205ENST00000594973 TFEBP19484 476 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms