RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 OR7D4Q8NG98 312 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 BADQ92934 168 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 VPS39Q96JC1 886 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 SHCBP1LQ9BZQ2 653 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 HOXD1Q9GZZ0 328 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 IL21Q9HBE4 155 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 PDFQ9HBH1 243 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 COPG2Q9UBF2 871 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 SATB2Q9UPW6 733 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 ACTL7AQ9Y615 435 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 OBSL1O75147 1896 aa15.29■□□□□ 0.04
PNKP-204ENST00000594661 MUSKO15146 869 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 TSPAN3O60637 253 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 CSPG5O95196 566 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 FGBP02675 491 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 MPOP05164 745 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 MBL2P11226 248 aaPredicted RBP15.28■□□□□ 0.04
PNKP-204ENST00000594661 HOXD9P28356 352 aaPredicted RBP15.28■□□□□ 0.04
PNKP-204ENST00000594661 PPP3CCP48454 512 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 CDH4P55283 916 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 DLG2Q15700 870 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 PIGGQ5H8A4 983 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 GPR107Q5VW38 600 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 GALNT18Q6P9A2 607 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 RFPL4BQ6ZWI9 263 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 HEATR4Q86WZ0 1026 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 PPHLN1Q8NEY8 458 aaKnown RBP15.28■□□□□ 0.04
PNKP-204ENST00000594661 TNIP2Q8NFZ5 429 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 ARRDC2Q8TBH0 407 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 FAR2Q96K12 515 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 ZNF347Q96SE7 839 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 COQ10BQ9H8M1 238 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 UXTQ9UBK9 157 aaPredicted RBP15.28■□□□□ 0.04
PNKP-204ENST00000594661 DNAJC16Q9Y2G8 782 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 MIA3Q5JRA6 1907 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 RNASEH2AO75792 299 aaKnown RBP15.28■□□□□ 0.04
PNKP-204ENST00000594661 CLPXO76031 633 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 SERPINE1P05121 402 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 XRCC1P18887 633 aaPredicted RBP15.28■□□□□ 0.04
PNKP-204ENST00000594661 IDH3AP50213 366 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 IRF9Q00978 393 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 CHRNEQ04844 493 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 NRF1Q16656 503 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 ADGRF1Q5T601 910 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 TXNDC8Q6A555 127 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 TMEM26Q6ZUK4 368 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 MAVSQ7Z434 540 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 FAM20CQ8IXL6 584 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 TNS4Q8IZW8 715 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 ATP13A1Q9HD20 1204 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 NSMCE4AQ9NXX6 385 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 DNMT3BQ9UBC3 853 aaKnown RBP15.28■□□□□ 0.04
PNKP-204ENST00000594661 SLC39A10Q9ULF5 831 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 TRAF6Q9Y4K3 522 aa15.28■□□□□ 0.04
PNKP-204ENST00000594661 BCAS2O75934 225 aaPredicted RBP15.27■□□□□ 0.04
PNKP-204ENST00000594661 C2P06681 752 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 GLDCP23378 1020 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 THOP1P52888 689 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 ZXDBP98169 803 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 PMS2P3Q13401 168 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 PEX6Q13608 980 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 RAB39AQ14964 217 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 PUS10Q3MIT2 529 aaKnown RBP15.27■□□□□ 0.04
PNKP-204ENST00000594661 PPP4R4Q6NUP7 873 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 C16orf89Q6UX73 402 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 GPR65Q8IYL9 337 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 LSMEM2Q8N112 164 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 SIX5Q8N196 739 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 ESX1Q8N693 406 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 ARL14EPQ8N8R7 260 aaPredicted RBP15.27■□□□□ 0.04
PNKP-204ENST00000594661 ACVR1CQ8NER5 493 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 SUN5Q8TC36 379 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 PDCD6IPQ8WUM4 868 aaKnown RBP15.27■□□□□ 0.04
PNKP-204ENST00000594661 CLP1Q92989 425 aaKnown RBP15.27■□□□□ 0.04
PNKP-204ENST00000594661 TADA1Q96BN2 335 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 MCMBPQ9BTE3 642 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 MAGEH1Q9H213 219 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 NANOGQ9H9S0 305 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 SLC2A6Q9UGQ3 507 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 TCAF1Q9Y4C2 921 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 PCDHGA3Q9Y5H0 932 aa15.27■□□□□ 0.04
PNKP-204ENST00000594661 ALPK3Q96L96 1907 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 PLOD2O00469 737 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 GMNNO75496 209 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 CLDN11O75508 207 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ABCB1P08183 1280 aaPredicted RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 RALBP11234 206 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 SAT1P21673 171 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 TGM1P22735 817 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 GRK2P25098 689 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ADSLP30566 484 aaPredicted RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 SMAD3P84022 425 aaKnown RBP15.26■□□□□ 0.03
PNKP-204ENST00000594661 CYP4F8P98187 520 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 CREMQ03060 361 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 PPIGQ13427 754 aaKnown RBP eCLIP15.26■□□□□ 0.035e-7■■■■□ 22.9
PNKP-204ENST00000594661 GRM3Q14832 879 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 FSCBQ5H9T9 825 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 IL31Q6EBC2 164 aa15.26■□□□□ 0.03
PNKP-204ENST00000594661 ESRP1Q6NXG1 681 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms