RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 HELZ2Q9BYK8 2649 aaKnown RBP17.72■□□□□ 0.43
CIRBP-243ENST00000593128 A0A0A6YYK5 440 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-243ENST00000593128 PDZK1P1A8MUH7 402 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-243ENST00000593128 RAD1O60671 282 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 MFAP3LO75121 409 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 COMTP21964 271 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 RAB15P59190 212 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 ADGRG6Q86SQ4 1221 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 VSTM4Q8IW00 320 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 TRAM1L1Q8N609 369 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 GDAP1Q8TB36 358 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 GLYATL1Q969I3 302 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 TRIB3Q96RU7 358 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 ZSCAN5AQ9BUG6 496 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-243ENST00000593128 GLOD4Q9HC38 313 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 MAGEE1Q9HCI5 957 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 TRIM39Q9HCM9 518 aa17.71■□□□□ 0.43
CIRBP-243ENST00000593128 DDX56Q9NY93 547 aaKnown RBP17.71■□□□□ 0.43
CIRBP-243ENST00000593128 COL6A6A6NMZ7 2263 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 KIR2DS5A0A0G2JLQ3 304 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 A0A0G2JNG1 304 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 ZNF487B1APH4 448 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 B4E171 279 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 KIR2DS3K7RE56 304 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 VIPP01282 170 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 TYRP1P17643 537 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 TSPAN7P41732 249 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 TNNT3P45378 269 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-243ENST00000593128 KIR2DS5Q14953 304 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 NOMO1Q15155 1222 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 WDR74Q6RFH5 385 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-243ENST00000593128 MFSD7Q6UXD7 560 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 LRRTM4Q86VH4 590 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 HAUS1Q96CS2 278 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 OLFM3Q96PB7 478 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 TSPY26PQ9H489 355 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 RAD18Q9NS91 495 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 SLC23A2Q9UGH3 650 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 SPO11Q9Y5K1 396 aa17.7■□□□□ 0.42
CIRBP-243ENST00000593128 A6NCN8 305 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 OR5K4A6NMS3 321 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 AURKAO14965 403 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 NDST3O95803 873 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 BPIP17213 487 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 AMD1P17707 334 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 PTPN3P26045 913 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 SLC1A1P43005 524 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 DCDC1P59894 354 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 CLCA4Q14CN2 919 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 TEX44Q53QW1 395 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 TMC3Q7Z5M5 1100 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 ZC3H18Q86VM9 953 aaKnown RBP17.69■□□□□ 0.42
CIRBP-243ENST00000593128 UNC5BQ8IZJ1 945 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 SLC25A41Q8N5S1 370 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 BMPERQ8N8U9 685 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 TFB1MQ8WVM0 346 aaKnown RBP17.69■□□□□ 0.42
CIRBP-243ENST00000593128 KIAA1143Q96AT1 154 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-243ENST00000593128 PLEKHG4BQ96PX9 1271 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 GPN2Q9H9Y4 310 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-243ENST00000593128 APMAPQ9HDC9 416 aa17.69■□□□□ 0.42
CIRBP-243ENST00000593128 SCHIP1Q9P0W5 487 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-243ENST00000593128 KLHL8Q9P2G9 620 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-243ENST00000593128 KMOO15229 486 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 CST8O60676 142 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 CDK14O94921 469 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 PRKAR1AP10644 381 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 PECAM1P16284 738 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-243ENST00000593128 ZNF7P17097 686 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-243ENST00000593128 RPL10P27635 214 aaKnown RBP17.68■□□□□ 0.42
CIRBP-243ENST00000593128 EPHA4P54764 986 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 DRG2P55039 364 aaKnown RBP17.68■□□□□ 0.42
CIRBP-243ENST00000593128 GFERP55789 205 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 MC2RQ01718 297 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 FOXM1Q08050 763 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 GTF2H3Q13889 308 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 LRRC38Q5VT99 294 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 CEACAM20Q6UY09 585 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 BZW1Q7L1Q6 419 aaKnown RBP17.68■□□□□ 0.42
CIRBP-243ENST00000593128 VSIG1Q86XK7 387 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 PLXDC1Q8IUK5 500 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 TRAPPC5Q8IUR0 188 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 CCDC50Q8IVM0 306 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 NLGN4XQ8N0W4 816 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 AVL9Q8NBF6 648 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 NLGN4YQ8NFZ3 816 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-243ENST00000593128 RTP4Q96DX8 246 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 TGM7Q96PF1 710 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 TEFMQ96QE5 360 aaKnown RBP17.68■□□□□ 0.42
CIRBP-243ENST00000593128 GOLPH3Q9H4A6 298 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 PDP2Q9P2J9 529 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 TENM4Q6N022 2769 aa17.68■□□□□ 0.42
CIRBP-243ENST00000593128 BOD1L1Q8NFC6 3051 aa17.67■□□□□ 0.42
CIRBP-243ENST00000593128 AKR1B15C9JRZ8 316 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-243ENST00000593128 POLR1CO15160 346 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-243ENST00000593128 RASSF9O75901 435 aa17.67■□□□□ 0.42
CIRBP-243ENST00000593128 SFTPCP11686 197 aa17.67■□□□□ 0.42
CIRBP-243ENST00000593128 NFKB1P19838 968 aa17.67■□□□□ 0.42
CIRBP-243ENST00000593128 SEPHS1P49903 392 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms