RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 INPP5AQ14642 412 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 LRRC14Q15048 493 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 SHBQ15464 509 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 TRIP6Q15654 476 aaKnown RBP9.56□□□□□ -0.88
DDX39A-220ENST00000593008 DBN1Q16643 649 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 HSP90AA5PQ58FG0 334 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 Q6ZSR6 202 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 DET1Q7L5Y6 550 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 OTUD6BQ8N6M0 293 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.56□□□□□ -0.88
DDX39A-220ENST00000593008 ACVR1CQ8NER5 493 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 OR2W6PQ8NHA6 318 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 LKAAEAR1Q8TD35 194 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 RHBDD1Q8TEB9 315 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 FBF1Q8TES7 1133 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 PYROXD1Q8WU10 500 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 STYXQ8WUJ0 223 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 CERS2Q96G23 380 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 KLHDC7BQ96G42 594 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 BMFQ96LC9 184 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 ELF4Q99607 663 aaPredicted RBP9.56□□□□□ -0.88
DDX39A-220ENST00000593008 ASB8Q9H765 288 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 VPS37BQ9H9H4 285 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 FBXO6Q9NRD1 293 aaPredicted RBP9.56□□□□□ -0.88
DDX39A-220ENST00000593008 IARS2Q9NSE4 1012 aaKnown RBP9.56□□□□□ -0.88
DDX39A-220ENST00000593008 PCOLCE2Q9UKZ9 415 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 TMEM98Q9Y2Y6 226 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 PRKAB1Q9Y478 270 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 PRSS21Q9Y6M0 314 aa9.56□□□□□ -0.88
DDX39A-220ENST00000593008 UQCRHLA0A096LP55 91 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 TMEM202A6NGA9 273 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 SMAPO00193 183 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 EIF3HO15372 352 aaKnown RBP eCLIP9.55□□□□□ -0.88
DDX39A-220ENST00000593008 FLRT2O43155 660 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 CBFA2T3O75081 653 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 FUCA1P04066 466 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 SHBGP04278 402 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 UQCRHP07919 91 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 GABRB3P28472 473 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 GMPRP36959 345 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 GPR1P46091 355 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 ARRB1P49407 418 aaPredicted RBP9.55□□□□□ -0.88
DDX39A-220ENST00000593008 PMS2P54278 862 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 DCDC1P59894 354 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 PRAMEP78395 509 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 CDK3Q00526 305 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 BNIP3Q12983 259 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 CTBP1Q13363 440 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 NFATC2Q13469 925 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 SUZ12Q15022 739 aaKnown RBP9.55□□□□□ -0.88
DDX39A-220ENST00000593008 PLA2G4EQ3MJ16 856 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 CCDC157Q569K6 752 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 ZNF542PQ5EBM4 170 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 SPANXN3Q5MJ09 141 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 GPRC6AQ5T6X5 926 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 ZNF470Q6ECI4 717 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 PNCKQ6P2M8 343 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 AFTPHQ6ULP2 937 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 MARK2Q7KZI7 788 aaKnown RBP9.55□□□□□ -0.88
DDX39A-220ENST00000593008 TAS2R42Q7RTR8 314 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 KCNMB4Q86W47 210 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 SERPINA9Q86WD7 417 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 TRAM1L1Q8N609 369 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 GSDMBQ8TAX9 411 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 FAM136AQ96C01 138 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 PDXPQ96GD0 296 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 ATXN7L3BQ96GX2 97 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 FRMD8Q9BZ67 464 aaPredicted RBP9.55□□□□□ -0.88
DDX39A-220ENST00000593008 TCEAL2Q9H3H9 227 aaPredicted RBP9.55□□□□□ -0.88
DDX39A-220ENST00000593008 FGF22Q9HCT0 170 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 MRPL40Q9NQ50 206 aaKnown RBP9.55□□□□□ -0.88
DDX39A-220ENST00000593008 CATSPERZQ9NTU4 200 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 NFKBIL1Q9UBC1 381 aaPredicted RBP9.55□□□□□ -0.88
DDX39A-220ENST00000593008 PLEKHM1Q9Y4G2 1056 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 PCDHGB2Q9Y5G2 931 aa9.55□□□□□ -0.88
DDX39A-220ENST00000593008 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 FOXO6A8MYZ6 492 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 H7C0S8 307 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 CD3EAPO15446 510 aaKnown RBP9.54□□□□□ -0.88
DDX39A-220ENST00000593008 RIPK2O43353 540 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 HYAL3O43820 417 aaPredicted RBP9.54□□□□□ -0.88
DDX39A-220ENST00000593008 PCDHGA12O60330 932 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 DFNA5O60443 496 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 POLBP06746 335 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 PMLP29590 882 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 HSD17B3P37058 310 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 GRK6P43250 576 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 CTSCP53634 463 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 CBLBQ13191 982 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 AGERQ15109 404 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 LONRF1Q17RB8 773 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 SKIDA1Q1XH10 827 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 KBTBD12Q3ZCT8 623 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 NEPROQ6NW34 567 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 FBXO38Q6PIJ6 1188 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 ADAMTSL4Q6UY14 1074 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 NAPRTQ6XQN6 538 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 DBX2Q6ZNG2 339 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 ZNF765Q7L2R6 523 aa9.54□□□□□ -0.88
DDX39A-220ENST00000593008 IQCHQ86VS3 1027 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms