RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CEACAM20Q6UY09 585 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 FAM129CQ86XR2 697 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 BMPERQ8N8U9 685 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 GPR26Q8NDV2 337 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 DTX3LQ8TDB6 740 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 TFB1MQ8WVM0 346 aaKnown RBP13.11□□□□□ -0.31
APOC1-209ENST00000592885 NKD1Q969G9 470 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
APOC1-209ENST00000592885 TEKT5Q96M29 485 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 VAT1Q99536 393 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 CEP41Q9BYV8 373 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 OR2AG1Q9H205 316 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 TSPY26PQ9H489 355 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 TRABDQ9H4I3 376 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 SLC39A1Q9NY26 324 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 CPNE7Q9UBL6 633 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 SHOC2Q9UQ13 582 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 B3GALT1Q9Y5Z6 326 aa13.11□□□□□ -0.31
APOC1-209ENST00000592885 ZNF106Q9H2Y7 1883 aaKnown RBP13.1□□□□□ -0.31
APOC1-209ENST00000592885 AKR1B15C9JRZ8 316 aaPredicted RBP13.1□□□□□ -0.31
APOC1-209ENST00000592885 SNX2O60749 519 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 PTPN3P26045 913 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 UGT1A3P35503 534 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 TNNT3P45378 269 aaPredicted RBP13.1□□□□□ -0.31
APOC1-209ENST00000592885 DYNLT1P63172 113 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 MC2RQ01718 297 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 INSCQ1MX18 579 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 ALS2CLQ60I27 953 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 MFSD7Q6UXD7 560 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 ADGRG6Q86SQ4 1221 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 ZNF761Q86XN6 746 aaPredicted RBP13.1□□□□□ -0.31
APOC1-209ENST00000592885 PLXDC1Q8IUK5 500 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 RBM12BQ8IXT5 1001 aaKnown RBP13.1□□□□□ -0.31
APOC1-209ENST00000592885 IL22RA1Q8N6P7 574 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 EXTL1Q92935 676 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 PMEPA1Q969W9 287 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 EFHD1Q9BUP0 239 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 FBXO8Q9NRD0 319 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 KLC4Q9NSK0 619 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 POT1Q9NUX5 634 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 OCIAD1Q9NX40 245 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.1□□□□□ -0.31
APOC1-209ENST00000592885 HACD3Q9P035 362 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 FAM153AQ9UHL3 310 aa13.1□□□□□ -0.31
APOC1-209ENST00000592885 TRBV23OR9-2A0A075B6M9 112 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 PRR19A6NJB7 356 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 TOX3O15405 576 aaPredicted RBP13.09□□□□□ -0.31
APOC1-209ENST00000592885 RAD1O60671 282 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 KCNJ13O60928 360 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 MT-CYBP00156 380 aaPredicted RBP13.09□□□□□ -0.31
APOC1-209ENST00000592885 EPOP01588 193 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 SLC4A1P02730 911 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 PIRTP0C851 137 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 ZNF7P17097 686 aaPredicted RBP13.09□□□□□ -0.31
APOC1-209ENST00000592885 BPIP17213 487 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 VCLP18206 1134 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 COMTP21964 271 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 MPSTP25325 297 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 HMGCLP35914 325 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 TBX2Q13207 712 aaPredicted RBP13.09□□□□□ -0.31
APOC1-209ENST00000592885 TFDP3Q5H9I0 405 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 AGAP9Q5VTM2 703 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 ANKS6Q68DC2 871 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 WASH2PQ6VEQ5 465 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 SPOCD1Q6ZMY3 1216 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 KDELC2Q7Z4H8 507 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 KATNAL2Q8IYT4 538 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 CACNA2D3Q8IZS8 1091 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 EXD3Q8N9H8 876 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 SPATA22Q8NHS9 363 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 BRSK1Q8TDC3 778 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 NCSTNQ92542 709 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 RTP4Q96DX8 246 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 CATSPER2Q96P56 530 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 SLC12A9Q9BXP2 914 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 ZCCHC2Q9C0B9 1178 aaKnown RBP13.09□□□□□ -0.31
APOC1-209ENST00000592885 ADNPQ9H2P0 1102 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 TRIT1Q9H3H1 467 aaKnown RBP13.09□□□□□ -0.31
APOC1-209ENST00000592885 OSGEPL1Q9H4B0 414 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 WASH6PQ9NQA3 447 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 STARD5Q9NSY2 213 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 PILRAQ9UKJ1 303 aa13.09□□□□□ -0.31
APOC1-209ENST00000592885 LOC285095A0A1B0GVY8 99 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 HACD1B0YJ81 288 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 CST8O60676 142 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 PPFIA2O75334 1257 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 PMPCBO75439 489 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 CDK14O94921 469 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 LCA5LO95447 670 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 VIPP01282 170 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 C9P02748 559 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 WT1P19544 449 aaPredicted RBP13.08□□□□□ -0.32
APOC1-209ENST00000592885 HLA-DPA1P20036 260 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 MAP4P27816 1152 aaKnown RBP13.08□□□□□ -0.32
APOC1-209ENST00000592885 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
APOC1-209ENST00000592885 WASHC5Q12768 1159 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 GTF2H3Q13889 308 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 MAP7Q14244 749 aa13.08□□□□□ -0.32
APOC1-209ENST00000592885 TBR1Q16650 682 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms