RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 DTX3LQ8TDB6 740 aa22.56■■□□□ 1.2
SPHK1-210ENST00000592299 UNKQ9C0B0 810 aaKnown RBP22.56■■□□□ 1.2
SPHK1-210ENST00000592299 PSD3Q9NYI0 1048 aa22.56■■□□□ 1.2
SPHK1-210ENST00000592299 GNPTGQ9UJJ9 305 aa22.56■■□□□ 1.2
SPHK1-210ENST00000592299 NCKAP1Q9Y2A7 1128 aa22.56■■□□□ 1.2
SPHK1-210ENST00000592299 VPS26AO75436 327 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 TM7SF2O76062 418 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 PYGLP06737 847 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 CCDC166P0CW27 439 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 COL6A2P12110 1019 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 RPS3P23396 243 aaKnown RBP eCLIP22.55■■□□□ 1.25e-7■■■□□ 15.2
SPHK1-210ENST00000592299 FAM124AQ86V42 546 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 CENPLQ8N0S6 344 aaPredicted RBP22.55■■□□□ 1.2
SPHK1-210ENST00000592299 NXNL1Q96CM4 212 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 GPR21Q99679 349 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 C1QTNF1Q9BXJ1 281 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 FOXQ1Q9C009 403 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 SARS2Q9NP81 518 aaKnown RBP22.55■■□□□ 1.2
SPHK1-210ENST00000592299 LTB4R2Q9NPC1 389 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 SMOXQ9NWM0 555 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 EMCNQ9ULC0 261 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 MED16Q9Y2X0 877 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 PRSS21Q9Y6M0 314 aa22.55■■□□□ 1.2
SPHK1-210ENST00000592299 KANSL1LA0AUZ9 987 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 FAM170BA6NMN3 283 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 MTX2O75431 263 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 GLRBP48167 497 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 STARD6P59095 220 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 CREB5Q02930 508 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 RAET1GQ6H3X3 334 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 ZNF687Q8N1G0 1237 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 SYNPOQ8N3V7 929 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 HMGB4Q8WW32 186 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 KCNJ9Q92806 393 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 DCUN1D1Q96GG9 259 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 SCYL1Q96KG9 808 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 POLMQ9NP87 494 aaPredicted RBP22.54■■□□□ 1.2
SPHK1-210ENST00000592299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.54■■□□□ 1.2
SPHK1-210ENST00000592299 NUMA1Q14980 2115 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 INPP4BO15327 924 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 PLRG1O43660 514 aaKnown RBP22.54■■□□□ 1.2
SPHK1-210ENST00000592299 PLIN3O60664 434 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 SHOX2O60902 331 aaPredicted RBP22.54■■□□□ 1.2
SPHK1-210ENST00000592299 KLHL2O95198 593 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 GPR1P46091 355 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 DLG1Q12959 904 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 SEL1L3Q68CR1 1132 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 TMEM207Q6UWW9 146 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 ZNF765Q7L2R6 523 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 CCDC91Q7Z6B0 441 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 KBTBD6Q86V97 674 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 ANKRD49Q8WVL7 239 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 BTN2A2Q8WVV5 523 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 CKAP2Q8WWK9 683 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 NMRAL1Q9HBL8 299 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 POPDC3Q9HBV1 291 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 GALPQ9UBC7 116 aa22.54■■□□□ 1.2
SPHK1-210ENST00000592299 TRMT6Q9UJA5 497 aaKnown RBP22.54■■□□□ 1.2
SPHK1-210ENST00000592299 K7ESM1 405 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 STK25O00506 426 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 SLC25A14O95258 325 aaPredicted RBP22.53■■□□□ 1.2
SPHK1-210ENST00000592299 DHRS4L1P0CG22 281 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 NEFHP12036 1026 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 GABRG2P18507 467 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 ITGB6P18564 788 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 SERPINB4P48594 390 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 ADPRHP54922 357 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 B4GALNT1Q00973 533 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 SFSWAPQ12872 951 aaKnown RBP22.53■■□□□ 1.2
SPHK1-210ENST00000592299 FAM83EQ2M2I3 478 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 CCDC153Q494R4 210 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 PAQR3Q6TCH7 311 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 DET1Q7L5Y6 550 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 LCA5Q86VQ0 697 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 PELI3Q8N2H9 469 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 PGBD3Q8N328 593 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 SIDT2Q8NBJ9 832 aaKnown RBP22.53■■□□□ 1.2
SPHK1-210ENST00000592299 GLYATL1Q969I3 302 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 OSBPL6Q9BZF3 934 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 PIKFYVEQ9Y2I7 2098 aa22.53■■□□□ 1.2
SPHK1-210ENST00000592299 TBC1D3DA0A087WVF3 549 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TBC1D3IA0A087WXS9 549 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TBC1D3EA0A087X179 549 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TBC1D3KA0A087X1G2 549 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TBC1D3FA6NER0 549 aaPredicted RBP22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TBC1D3LB9A6J9 549 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 H3BMM5 538 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TRIM16O95361 564 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 PROCP04070 461 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 LTA4HP09960 611 aaKnown RBP22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TBC1D3HP0C7X1 549 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 ZNF37AP17032 561 aaPredicted RBP22.52■■□□□ 1.2
SPHK1-210ENST00000592299 MSH3P20585 1137 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 DPTQ07507 201 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TSNAXIP1Q2TAA8 658 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 AGAP9Q5VTM2 703 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TBC1D3GQ6DHY5 549 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 TBC1D3CQ6IPX1 549 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 UGT3A1Q6NUS8 523 aa22.52■■□□□ 1.2
SPHK1-210ENST00000592299 USP30Q70CQ3 517 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms