RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 ADAMTSL3P82987 1691 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 CHD1O14646 1710 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 ZCWPW2A0A1B0GU75 182 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 PMS2P5A8MQ11 134 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 B4E171 279 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 VCYO14598 125 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 DVL1O14640 695 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 ZNHIT1O43257 154 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 TMCC2O75069 709 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 ZBED4O75132 1171 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 LDLRP01130 860 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 EGFP01133 1207 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 TUBBP07437 444 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 ZNF23P17027 643 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 UBA7P41226 1012 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 TSPAN7P41732 249 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 DVL1P1P54792 670 aaPredicted RBP3.39□□□□□ -1.87
TPM4-214ENST00000591645 EIF3BP55884 814 aaKnown RBP3.39□□□□□ -1.87
TPM4-214ENST00000591645 ISL1P61371 349 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 ERVK11-1P61568 191 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 TUBB4BP68371 445 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 SREBF2Q12772 1141 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 PPIGQ13427 754 aaKnown RBP eCLIP3.39□□□□□ -1.87
TPM4-214ENST00000591645 DRAP1Q14919 205 aaPredicted RBP3.39□□□□□ -1.87
TPM4-214ENST00000591645 CCNG2Q16589 344 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 MYLK3Q32MK0 819 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 DCST1Q5T197 706 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 CCDC30Q5VVM6 783 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 ARHGAP17Q68EM7 881 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 TTI2Q6NXR4 508 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 DPPA4Q7L190 304 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 UCMAQ8WVF2 138 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 HTRA1Q92743 480 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 HVCN1Q96D96 273 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 LGALS12Q96DT0 336 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 RNF125Q96EQ8 232 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 SAAL1Q96ER3 474 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 SERINC2Q96SA4 455 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 ACOX2Q99424 681 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 PCYT2Q99447 389 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 PRKRIP1Q9H875 184 aaPredicted RBP3.39□□□□□ -1.87
TPM4-214ENST00000591645 SEBOXQ9HB31 216 aaPredicted RBP3.39□□□□□ -1.87
TPM4-214ENST00000591645 SCRT2Q9NQ03 307 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 ACSS1Q9NUB1 689 aaPredicted RBP3.39□□□□□ -1.87
TPM4-214ENST00000591645 GGA3Q9NZ52 723 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 ABI3Q9P2A4 366 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 PADI3Q9ULW8 664 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 CYP46A1Q9Y6A2 500 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 KDM3AQ9Y4C1 1321 aa3.39□□□□□ -1.87
TPM4-214ENST00000591645 A0A1W2PRQ8 180 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 FAM170AA1A519 330 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 SYNGR3O43761 229 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 PRKNO60260 465 aaPredicted RBP3.38□□□□□ -1.87
TPM4-214ENST00000591645 GFPT2O94808 682 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 SEC31AO94979 1220 aaKnown RBP3.38□□□□□ -1.87
TPM4-214ENST00000591645 POLR2CP19387 275 aaPredicted RBP3.38□□□□□ -1.87
TPM4-214ENST00000591645 DCTP40126 519 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 PAFAH1B1P43034 410 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 RPL24P83731 157 aaKnown RBP3.38□□□□□ -1.87
TPM4-214ENST00000591645 GRIK2Q13002 908 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 OLIG2Q13516 323 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 COL28A1Q2UY09 1125 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 KRT71Q3SY84 523 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 TMEM35AQ53FP2 167 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 MFSD4BQ5TF39 518 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 SLC35E4Q6ICL7 350 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 TSPYL6Q8N831 410 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 SLC38A5Q8WUX1 472 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 ZNF524Q96C55 264 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 BARD1Q99728 777 aaKnown RBP3.38□□□□□ -1.87
TPM4-214ENST00000591645 POLR3CQ9BUI4 534 aaPredicted RBP3.38□□□□□ -1.87
TPM4-214ENST00000591645 BARHL1Q9BZE3 327 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 DDX43Q9NXZ2 648 aaKnown RBP3.38□□□□□ -1.87
TPM4-214ENST00000591645 HAO1Q9UJM8 370 aa3.38□□□□□ -1.87
TPM4-214ENST00000591645 AQRO60306 1485 aaKnown RBP eCLIP3.37□□□□□ -1.873e-10■■■■■ 28.2
TPM4-214ENST00000591645 A0A0C4DFX4 3053 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 IGLV5-45A0A087WSX0 123 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 A0A087X0M5 115 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 A0A1B0GX30 115 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 A0A1W2PRG0 241 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 FSD2A1L4K1 749 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 F5H0A9 414 aaPredicted RBP3.37□□□□□ -1.87
TPM4-214ENST00000591645 UGT1A1P22309 533 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 UBA1P22314 1058 aaKnown RBP3.37□□□□□ -1.87
TPM4-214ENST00000591645 KRT20P35900 424 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 APOBEC1P41238 236 aaKnown RBP3.37□□□□□ -1.87
TPM4-214ENST00000591645 RAD52P43351 418 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 RUNX1T1Q06455 604 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 NEXNQ0ZGT2 675 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 ALDH1L2Q3SY69 923 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 CFAP58Q5T655 872 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 C16orf54Q6UWD8 224 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 TMCO3Q6UWJ1 677 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 GPR180Q86V85 440 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 HEATR4Q86WZ0 1026 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 ACVR1CQ8NER5 493 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 OR10V1Q8NGI7 309 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 CTCFLQ8NI51 663 aaPredicted RBP3.37□□□□□ -1.87
TPM4-214ENST00000591645 TAS1R2Q8TE23 839 aa3.37□□□□□ -1.87
TPM4-214ENST00000591645 APBB2Q92870 758 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms