RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ART4Q93070 314 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 SH3KBP1Q96B97 665 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 EID2BQ96D98 161 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 RNF157Q96PX1 679 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 SLC38A3Q99624 504 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 ARHGAP9Q9BRR9 750 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 ADGRE3Q9BY15 652 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 ZFAND3Q9H8U3 227 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 OCIAD1Q9NX40 245 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 SLC39A1Q9NY26 324 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 DTLQ9NZJ0 730 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 TMEM9Q9P0T7 183 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 TBC1D29Q9UFV1 150 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 ZNHIT2Q9UHR6 403 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 PCYT1BQ9Y5K3 369 aaPredicted RBP10.3□□□□□ -0.76
VPS4B-207ENST00000591519 B3GALT1Q9Y5Z6 326 aa10.3□□□□□ -0.76
VPS4B-207ENST00000591519 OAS3Q9Y6K5 1087 aaKnown RBP10.3□□□□□ -0.76
VPS4B-207ENST00000591519 TRBV23OR9-2A0A075B6M9 112 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 KIR2DS5A0A0G2JLQ3 304 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 A0A0G2JNG1 304 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 C1orf232A0A0U1RR37 186 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 OR5K4A6NMS3 321 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 FADS2P1A8MWK0 482 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 GPR89AB7ZAQ6 455 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 KIR2DS3K7RE56 304 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 SUV39H1O43463 412 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 SLC28A2O43868 658 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 NUAK1O60285 661 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 MAP3K6O95382 1288 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 WISP1O95388 367 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 ASMTLO95671 621 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 JCHAINP01591 159 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 ATP1A1P05023 1023 aaKnown RBP10.29□□□□□ -0.76
VPS4B-207ENST00000591519 TMEM253P0C7T8 217 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 GPR89BP0CG08 455 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 TNNT1P13805 278 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 MAN1A1P33908 653 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 MAGEA1P43355 309 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 ATP1A2P50993 1020 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 EPHA4P54764 986 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 RAB15P59190 212 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 IFI35P80217 286 aaPredicted RBP10.29□□□□□ -0.76
VPS4B-207ENST00000591519 MC2RQ01718 297 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 HHEXQ03014 270 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 NFATC3Q12968 1075 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 MESDQ14696 234 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 KIR2DS5Q14953 304 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 DCAF12Q5T6F0 453 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 MARK2Q7KZI7 788 aaKnown RBP10.29□□□□□ -0.76
VPS4B-207ENST00000591519 CHST15Q7LFX5 561 aaPredicted RBP10.29□□□□□ -0.76
VPS4B-207ENST00000591519 LYSMD3Q7Z3D4 306 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 TMC3Q7Z5M5 1100 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 SLC9B2Q86UD5 537 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 AVL9Q8NBF6 648 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 CCNYQ8ND76 341 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 LPCAT1Q8NF37 534 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 SLC35G2Q8TBE7 412 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 RAPGEF5Q92565 580 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 PMEPA1Q969W9 287 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 TADA1Q96BN2 335 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 AHCYL2Q96HN2 611 aaKnown RBP10.29□□□□□ -0.76
VPS4B-207ENST00000591519 TEFMQ96QE5 360 aaKnown RBP10.29□□□□□ -0.76
VPS4B-207ENST00000591519 ZPBPQ9BS86 351 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 HERPUD2Q9BSE4 406 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.29□□□□□ -0.76
VPS4B-207ENST00000591519 FAM117AQ9C073 453 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 CARD9Q9H257 536 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 ADNPQ9H2P0 1102 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 EPB41L1Q9H4G0 881 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 CLMPQ9H6B4 373 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 MAGEE1Q9HCI5 957 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 TRIM39Q9HCM9 518 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 FBXO8Q9NRD0 319 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 GEMIN8Q9NWZ8 242 aaKnown RBP10.29□□□□□ -0.76
VPS4B-207ENST00000591519 PKD2L2Q9NZM6 624 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 PILRAQ9UKJ1 303 aa10.29□□□□□ -0.76
VPS4B-207ENST00000591519 MYO18BQ8IUG5 2567 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 C3orf70A6NLC5 250 aaPredicted RBP10.28□□□□□ -0.76
VPS4B-207ENST00000591519 CHUKO15111 745 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 GRID2O43424 1007 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 DUX1O43812 170 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 FAM87AP0C7U9 286 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 F3P13726 295 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 SLC2A4P14672 509 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 MPSTP25325 297 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 CYLC1P35663 651 aaPredicted RBP10.28□□□□□ -0.76
VPS4B-207ENST00000591519 CD86P42081 329 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 CSRP3P50461 194 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 DCDC1P59894 354 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 CYP4F2P78329 520 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 SPA17Q15506 151 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 SLC14A2Q15849 920 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 C4orf48Q5BLP8 95 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 ZFYVE27Q5T4F4 411 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 PDPK2PQ6A1A2 396 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 SLC9A4Q6AI14 798 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 CACNA2D3Q8IZS8 1091 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.28□□□□□ -0.76
VPS4B-207ENST00000591519 IL22RA1Q8N6P7 574 aa10.28□□□□□ -0.76
VPS4B-207ENST00000591519 PLD5Q8N7P1 536 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms