RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 DNAJB13P59910 316 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 PRKCQQ04759 706 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 KRR1Q13601 381 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 CEACAM7Q14002 265 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 CCNYL2Q5T2Q4 361 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 FAM91A1Q658Y4 838 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 ELMSAN1Q6PJG2 1045 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 ELMO1Q92556 727 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 NUSAP1Q9BXS6 441 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 ATP13A3Q9H7F0 1226 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 INTS10Q9NVR2 710 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 GIMAP2Q9UG22 337 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 DGKBQ9Y6T7 804 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 SDHDO14521 159 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 CBFA2T3O75081 653 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 MAGEA6P43360 314 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 IDH2P48735 452 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 TAZQ16635 292 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 NPWQ8N729 165 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 FEM1CQ96JP0 617 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 CDK15Q96Q40 435 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 SORT1Q99523 831 aa16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 SAMHD1Q9Y3Z3 626 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-215ENST00000590574 CORO1AP31146 461 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 HOXA11P31270 313 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ARHGAP15Q53QZ3 475 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 LYPLAL1Q5VWZ2 237 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 CILP2Q8IUL8 1156 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 KBTBD2Q8IY47 623 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 LEMD2Q8NC56 503 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 TSSK3Q96PN8 268 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 TDRD1Q9BXT4 1180 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 G3V2L1 256 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 CAPN15O75808 1086 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 HDCP19113 662 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 JAK1P23458 1154 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 GPR15P49685 360 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 CIPCQ9C0C6 399 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 EMCNQ9ULC0 261 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 LOC100506127A0A0U1RQW1 187 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ELOVL7A1L3X0 281 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ALOX12P18054 663 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 CACNG1Q06432 222 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 IFNLR1Q8IU57 520 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 MAPK15Q8TD08 544 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 SMOC2Q9H3U7 446 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 MRM3Q9HC36 420 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 PCDHB1Q9Y5F3 818 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 TLL2Q9Y6L7 1015 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 LZTS3O60299 673 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ACSL4O60488 711 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 GPR32O75388 356 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ECI2O75521 394 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 KRT75O95678 551 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 CKBP12277 381 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ZNF33AQ06730 810 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 CTC1Q2NKJ3 1217 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 LDLRAP1Q5SW96 308 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 MSANTD2Q6P1R3 559 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 TMEM126BQ8IUX1 230 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 OR10A6Q8NH74 314 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 RBM4BQ9BQ04 359 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 RBM4Q9BWF3 364 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ARIH1Q9Y4X5 557 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 IFRD1O00458 451 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 TULP3O75386 442 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 C1RP00736 705 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 NR4A1P22736 598 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 RXRGP48443 463 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 TAF1AQ15573 450 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 RFX4Q33E94 735 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 PABPC1LQ4VXU2 614 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ARNTL2Q8WYA1 636 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 STARD8Q92502 1023 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 KCNA7Q96RP8 456 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 C20orf27Q9GZN8 174 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 MAGEH1Q9H213 219 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 ZFYVE1Q9HBF4 777 aa16.98■□□□□ 0.31
SMARCA4-215ENST00000590574 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 DUSP11O75319 330 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 F2P00734 622 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 GPC1P35052 558 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 ALDH9A1P49189 494 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 SULT2A1Q06520 285 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 VARS2Q5ST30 1063 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 FBXL22Q6P050 247 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 CRTC3Q6UUV7 619 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 CYP4Z1Q86W10 505 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 ABCA3Q99758 1704 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 ZCWPW2A0A1B0GU75 182 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 PQBP1O60828 265 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 SEC24AO95486 1093 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 PFKPQ01813 784 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 HJURPQ8NCD3 748 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 GRIN3AQ8TCU5 1115 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 MZB1Q8WU39 189 aa16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 POLR3BQ9NW08 1133 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-215ENST00000590574 CDH4P55283 916 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms