RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CASS4Q9NQ75 786 aa17.12■□□□□ 0.33
RETREG3-210ENST00000590541 VPS18Q9P253 973 aa17.12■□□□□ 0.33
RETREG3-210ENST00000590541 ANAPC7Q9UJX3 599 aa17.12■□□□□ 0.33
RETREG3-210ENST00000590541 ESPL1Q14674 2120 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 KIR2DS5A0A0G2JLQ3 304 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 A0A0G2JNG1 304 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 LILRA5A6NI73 299 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 KIR2DS3K7RE56 304 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 PDHA1P08559 390 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 TPM1P09493 284 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 F3P13726 295 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 SERPINB6P35237 376 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 SEPHS1P49903 392 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 MAXP61244 160 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 DNASE1L3Q13609 305 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 IL11RAQ14626 422 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 KIR2DS5Q14953 304 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 HADHQ16836 314 aaKnown RBP17.11■□□□□ 0.33
RETREG3-210ENST00000590541 ARMC12Q5T9G4 340 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 TMCO3Q6UWJ1 677 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 MAMDC2Q7Z304 686 aaPredicted RBP17.11■□□□□ 0.33
RETREG3-210ENST00000590541 POLNQ7Z5Q5 900 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 TICAM1Q8IUC6 712 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 LRRC49Q8IUZ0 686 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 RASGRP3Q8IV61 690 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 OR8K1Q8NGG5 319 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 CT55Q8WUE5 264 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 ELMO2Q96JJ3 720 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 RIOK2Q9BVS4 552 aaKnown RBP17.11■□□□□ 0.33
RETREG3-210ENST00000590541 MLXIPLQ9NP71 852 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 CPNE7Q9UBL6 633 aa17.11■□□□□ 0.33
RETREG3-210ENST00000590541 CNOT6Q9ULM6 557 aaKnown RBP17.11■□□□□ 0.33
RETREG3-210ENST00000590541 TCP11X1B4DZS4 312 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 FZD6O60353 706 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 SNX2O60749 519 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 SPAG6O75602 509 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 PYGLP06737 847 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 RARAP10276 462 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 FGF5P12034 268 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 ACP5P13686 325 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 SLC2A4P14672 509 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 IL1R2P27930 398 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 GARSP41250 739 aaKnown RBP17.1■□□□□ 0.33
RETREG3-210ENST00000590541 UBE2IP63279 158 aaKnown RBP17.1■□□□□ 0.33
RETREG3-210ENST00000590541 MRPL49Q13405 166 aaKnown RBP17.1■□□□□ 0.33
RETREG3-210ENST00000590541 INPP5JQ15735 1006 aaPredicted RBP17.1■□□□□ 0.33
RETREG3-210ENST00000590541 PRR30Q53SZ7 412 aaPredicted RBP17.1■□□□□ 0.33
RETREG3-210ENST00000590541 CPZQ66K79 652 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 RUFY1Q96T51 708 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 ZNF768Q9H5H4 540 aaKnown RBP17.1■□□□□ 0.33
RETREG3-210ENST00000590541 LHX9Q9NQ69 397 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 IGSF5Q9NSI5 407 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.1■□□□□ 0.33
RETREG3-210ENST00000590541 ZNHIT6Q9NWK9 470 aaKnown RBP17.1■□□□□ 0.33
RETREG3-210ENST00000590541 UVRAGQ9P2Y5 699 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 LNPEPQ9UIQ6 1025 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 PADI1Q9ULC6 663 aa17.1■□□□□ 0.33
RETREG3-210ENST00000590541 PCDHGA9Q9Y5G4 932 aaKnown RBP17.1■□□□□ 0.33
RETREG3-210ENST00000590541 SSU72P8A0A1W2PR75 194 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 WIPF3A6NGB9 483 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 TOX3O15405 576 aaPredicted RBP17.09■□□□□ 0.33
RETREG3-210ENST00000590541 H2AFZP0C0S5 128 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 CCNYL3P0C7X3 344 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 LEPRP48357 1165 aaKnown RBP17.09■□□□□ 0.33
RETREG3-210ENST00000590541 PGDP52209 483 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 SLC18A3Q16572 532 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 SMTNL2Q2TAL5 461 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 RALGPS1Q5JS13 557 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 H2AFVQ71UI9 128 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 BBS5Q8N3I7 341 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 HSPH1Q92598 858 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 TGM7Q96PF1 710 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 CSPG4P5Q96PW8 444 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 PLEKHG4BQ96PX9 1271 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 WDR24Q96S15 920 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 DNAJC7Q99615 494 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 SLC25A23Q9BV35 468 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 BRD8Q9H0E9 1235 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 TSPY26PQ9H489 355 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 ACTL8Q9H568 366 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 UCK1Q9HA47 277 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 SCHIP1Q9P0W5 487 aaPredicted RBP17.09■□□□□ 0.33
RETREG3-210ENST00000590541 SLC30A1Q9Y6M5 507 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 MED13Q9UHV7 2174 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 CELSR2Q9HCU4 2923 aa17.09■□□□□ 0.33
RETREG3-210ENST00000590541 RP1L1Q8IWN7 2480 aaPredicted RBP17.08■□□□□ 0.33
RETREG3-210ENST00000590541 A0A0J9YYE9 177 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 OR5K4A6NMS3 321 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 C21orf140B9A014 251 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 MAFKO60675 156 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 TIAF1O95411 115 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 TRBC1P01850 177 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 ZNF30P17039 623 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 TYRP1P17643 537 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 STC1P52823 247 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 SLC25A11Q02978 314 aaKnown RBP17.08■□□□□ 0.32
RETREG3-210ENST00000590541 CHAF1BQ13112 559 aa17.08■□□□□ 0.32
RETREG3-210ENST00000590541 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
RETREG3-210ENST00000590541 PAPD7Q5XG87 772 aaKnown RBP17.08■□□□□ 0.32
RETREG3-210ENST00000590541 NSMCE1Q8WV22 266 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms