RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 RIMKLBQ9ULI2 386 aa16.65■□□□□ 0.26
LSM14A-208ENST00000590416 BTBD3Q9Y2F9 522 aa16.65■□□□□ 0.26
LSM14A-208ENST00000590416 PRKAB1Q9Y478 270 aa16.65■□□□□ 0.26
LSM14A-208ENST00000590416 ZNF292O60281 2723 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 ZFC3H1O60293 1989 aaKnown RBP16.64■□□□□ 0.25
LSM14A-208ENST00000590416 CCDC162PA2VCL2 907 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 H7C0S8 307 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 CDK14O94921 469 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 GOT2P00505 430 aaKnown RBP16.64■□□□□ 0.25
LSM14A-208ENST00000590416 CELA2BP08218 269 aaPredicted RBP16.64■□□□□ 0.25
LSM14A-208ENST00000590416 RALBP11234 206 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 PAMP19021 973 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 CA5AP35218 305 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 ARL4CP56559 192 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 SLC7A5Q01650 507 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 TMEM115Q12893 351 aaPredicted RBP16.64■□□□□ 0.25
LSM14A-208ENST00000590416 ILF3Q12906 894 aaKnown RBP eCLIP16.64■□□□□ 0.259e-9■■■■■ 29.8
LSM14A-208ENST00000590416 SMAD1Q15797 465 aaKnown RBP16.64■□□□□ 0.25
LSM14A-208ENST00000590416 FASTKD1Q53R41 847 aaKnown RBP16.64■□□□□ 0.25
LSM14A-208ENST00000590416 HIBCHQ6NVY1 386 aaPredicted RBP16.64■□□□□ 0.25
LSM14A-208ENST00000590416 DET1Q7L5Y6 550 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 CHST15Q7LFX5 561 aaPredicted RBP16.64■□□□□ 0.25
LSM14A-208ENST00000590416 TRAPPC5Q8IUR0 188 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 SLC25A45Q8N413 288 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 DDHD1Q8NEL9 900 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 ZNF669Q96BR6 464 aaPredicted RBP16.64■□□□□ 0.25
LSM14A-208ENST00000590416 MFSD3Q96ES6 412 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 KIFC1Q9BW19 673 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 CARD6Q9BX69 1037 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 GSDMCQ9BYG8 508 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 CLPBQ9H078 707 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 RMI1Q9H9A7 625 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 SMOXQ9NWM0 555 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 TMPRSS11EQ9UL52 423 aa16.64■□□□□ 0.25
LSM14A-208ENST00000590416 CFAP99D6REC4 459 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 GRID2O43424 1007 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 VEGFDO43915 354 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 NUAK1O60285 661 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 DNAJC6O75061 913 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 BANF1O75531 89 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 FUCA1P04066 466 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 PRSS56P0CW18 603 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 ACRV1P26436 265 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 CDKN1CP49918 316 aaPredicted RBP16.63■□□□□ 0.25
LSM14A-208ENST00000590416 DHX9Q08211 1270 aaKnown RBP16.63■□□□□ 0.25
LSM14A-208ENST00000590416 INSCQ1MX18 579 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 GPR33Q49SQ1 333 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 KHDC1Q4VXA5 237 aaKnown RBP16.63■□□□□ 0.25
LSM14A-208ENST00000590416 PYCR3Q53H96 274 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 FNBP1LQ5T0N5 605 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 PSAPL1Q6NUJ1 521 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 LRRTM4Q86VH4 590 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 SERPINA9Q86WD7 417 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 PDIK1LQ8N165 341 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 NXPE1Q8N323 547 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 MMGT1Q8N4V1 131 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 OR4L1Q8NH43 312 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 CCL4L1Q8NHW4 92 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 SCG3Q8WXD2 468 aaKnown RBP16.63■□□□□ 0.25
LSM14A-208ENST00000590416 PEX13Q92968 403 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 STAMBPL1Q96FJ0 436 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 TTC1Q99614 292 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 COPS8Q99627 209 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 LRRC1Q9BTT6 524 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 DUSP23Q9BVJ7 150 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 NLGN3Q9NZ94 848 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 WHRNQ9P202 907 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 FTSJ1Q9UET6 329 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 CSNK1G3Q9Y6M4 447 aa16.63■□□□□ 0.25
LSM14A-208ENST00000590416 MAGEB16A2A368 324 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 DCDC2BA2VCK2 349 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 GPR89AB7ZAQ6 455 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 ZNF500O60304 480 aaPredicted RBP16.62■□□□□ 0.25
LSM14A-208ENST00000590416 GPR89BP0CG08 455 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 ACP5P13686 325 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 AK4P27144 223 aaPredicted RBP16.62■□□□□ 0.25
LSM14A-208ENST00000590416 PBLDP30039 288 aaPredicted RBP16.62■□□□□ 0.25
LSM14A-208ENST00000590416 FOXN2P32314 431 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 ACTR1BP42025 376 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 NOVA1P51513 510 aaKnown RBP16.62■□□□□ 0.25
LSM14A-208ENST00000590416 ACTR1AP61163 376 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 ACVR1Q04771 509 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 HIF1AQ16665 826 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 HP1BP3Q5SSJ5 553 aaPredicted RBP16.62■□□□□ 0.25
LSM14A-208ENST00000590416 DUPD1Q68J44 220 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 SLC30A9Q6PML9 568 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 TMEM220Q6QAJ8 160 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 KANSL1Q7Z3B3 1105 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 NOA1Q8NC60 698 aaKnown RBP16.62■□□□□ 0.25
LSM14A-208ENST00000590416 OR4C6Q8NH72 309 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 HEXDCQ8WVB3 486 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 CNDP2Q96KP4 475 aaKnown RBP16.62■□□□□ 0.25
LSM14A-208ENST00000590416 PWWP2AQ96N64 755 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 TREX1Q9NSU2 369 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 CATSPERZQ9NTU4 200 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 TRNAU1APQ9NX07 287 aaKnown RBP16.62■□□□□ 0.25
LSM14A-208ENST00000590416 ZDHHC3Q9NYG2 299 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 SIRPGQ9P1W8 387 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 PCOLCE2Q9UKZ9 415 aa16.62■□□□□ 0.25
LSM14A-208ENST00000590416 PLEKHM1Q9Y4G2 1056 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms