RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 KLF15Q9UIH9 416 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 PNMA8BQ9ULN7 279 aaPredicted RBP19.98■□□□□ 0.79
ATG4D-208ENST00000588667 FADS2P1A8MWK0 482 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 TNFRSF10CO14798 259 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 BUD23O43709 281 aaKnown RBP19.98■□□□□ 0.79
ATG4D-208ENST00000588667 SDC3O75056 442 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 TPH1P17752 444 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 OAS2P29728 719 aaKnown RBP19.98■□□□□ 0.79
ATG4D-208ENST00000588667 ZNF140P52738 457 aaPredicted RBP19.98■□□□□ 0.79
ATG4D-208ENST00000588667 BNIP3Q12983 259 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 POU6F1Q14863 301 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 ALG11Q2TAA5 492 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 INAVAQ3KP66 663 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 C3orf62Q6ZUJ4 267 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 GATAD2AQ86YP4 633 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 CCNJLQ8IV13 435 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 DTX3LQ8TDB6 740 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 PDXPQ96GD0 296 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 COX14Q96I36 57 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 SIGLEC10Q96LC7 697 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 TBATAQ96M53 351 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 EBNA1BP2Q99848 306 aaKnown RBP19.98■□□□□ 0.79
ATG4D-208ENST00000588667 NAT9Q9BTE0 207 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 FGF22Q9HCT0 170 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 ZC3H7BQ9UGR2 993 aaKnown RBP19.98■□□□□ 0.79
ATG4D-208ENST00000588667 APOBEC3BQ9UH17 382 aaKnown RBP19.98■□□□□ 0.79
ATG4D-208ENST00000588667 MAD1L1Q9Y6D9 718 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 DGKBQ9Y6T7 804 aa19.98■□□□□ 0.79
ATG4D-208ENST00000588667 RASGRF2O14827 1237 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 LDB2O43679 373 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 TCEA3O75764 348 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 RASGRP1O95267 797 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 GSTA2P09210 222 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 DGKAP23743 735 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 GRK6P43250 576 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 HK3P52790 923 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 SESN2P58004 480 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-208ENST00000588667 GPX6P59796 221 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 SRP54P61011 504 aaKnown RBP19.97■□□□□ 0.79
ATG4D-208ENST00000588667 CAPN12Q6ZSI9 719 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 KANSL1Q7Z3B3 1105 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 PIP4P1Q86T03 277 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 IGDCC3Q8IVU1 814 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 NAXDQ8IW45 347 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 AGGF1Q8N302 714 aaeCLIP19.97■□□□□ 0.79
ATG4D-208ENST00000588667 OR4K2Q8NGD2 314 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 SLC13A1Q9BZW2 595 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 PPCSQ9HAB8 311 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 TMBIM4Q9HC24 238 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 IL26Q9NPH9 171 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 BFARQ9NZS9 450 aa19.97■□□□□ 0.79
ATG4D-208ENST00000588667 INPP4BO15327 924 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 SSTR1P30872 391 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 SEPT6Q14141 434 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 PUM1Q14671 1186 aaKnown RBP eCLIP19.96■□□□□ 0.79
ATG4D-208ENST00000588667 PTPRCAPQ14761 206 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 HID1Q8IV36 788 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 RBFAQ8N0V3 343 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 ZNF548Q8NEK5 533 aaPredicted RBP19.96■□□□□ 0.79
ATG4D-208ENST00000588667 OR1E3Q8WZA6 343 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 TSACCQ96A04 125 aaPredicted RBP19.96■□□□□ 0.79
ATG4D-208ENST00000588667 STAMBPL1Q96FJ0 436 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 CENPHQ9H3R5 247 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 CNOT6Q9ULM6 557 aaKnown RBP19.96■□□□□ 0.79
ATG4D-208ENST00000588667 SLC17A4Q9Y2C5 497 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 KCTD3Q9Y597 815 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 SPTBN2O15020 2390 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 PLXNB3Q9ULL4 1909 aa19.96■□□□□ 0.79
ATG4D-208ENST00000588667 COL5A1P20908 1838 aaPredicted RBP19.95■□□□□ 0.78
ATG4D-208ENST00000588667 GLYATL1P3A0A0U1RQE8 302 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 PRSS38A1L453 326 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 SH3BP5O60239 455 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 CEACAM5P06731 702 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 CSRP1P21291 193 aaKnown RBP19.95■□□□□ 0.78
ATG4D-208ENST00000588667 MGAT1P26572 445 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 HADHAP40939 763 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 NPY2RP49146 381 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 KCTD16Q68DU8 428 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 CASC4Q6P4E1 433 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 FAM151BQ6UXP7 276 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 TRIM74Q86UV6 250 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 CFAP36Q96G28 342 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 VPS35Q96QK1 796 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 LRRC61Q9BV99 259 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 TCEAL2Q9H3H9 227 aaPredicted RBP19.95■□□□□ 0.78
ATG4D-208ENST00000588667 CAAP1Q9H8G2 361 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 SAMD15Q9P1V8 674 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 SPASTQ9UBP0 616 aa19.95■□□□□ 0.78
ATG4D-208ENST00000588667 ZFC3H1O60293 1989 aaKnown RBP19.95■□□□□ 0.78
ATG4D-208ENST00000588667 EXOC1LA0A1B0GW35 172 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 TLDC2A0PJX2 215 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 HMGB1P1B2RPK0 211 aaPredicted RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 STX2P32856 288 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 LAMB3Q13751 1172 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 KLHL38Q2WGJ6 581 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 CERCAMQ5T4B2 595 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 RD3Q7Z3Z2 195 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 PHYKPLQ8IUZ5 450 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 MPP5Q8N3R9 675 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 SLC25A45Q8N413 288 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms