RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	CLASP2	O75122	1294 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	H6PD	O95479	791 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ESRRB	O95718	433 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	S100B	P04271	92 aa	Predicted RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	FGFR3	P22607	806 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TTK	P33981	857 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TUFM	P49411	452 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ZNF140	P52738	457 aa	Predicted RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ADAR	P55265	1226 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	NME5	P56597	212 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	IL2	P60568	153 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	SH3BP2	P78314	561 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	APOF	Q13790	326 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PDCD4	Q53EL6	469 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	MTX3	Q5HYI7	312 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	IL31	Q6EBC2	164 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ZNF549	Q6P9A3	640 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	BLOC1S3	Q6QNY0	202 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TMEM207	Q6UWW9	146 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	GLT6D1	Q7Z4J2	308 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	DEFB128	Q7Z7B8	93 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CHERP	Q8IWX8	916 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TERB1	Q8NA31	727 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TSPAN14	Q8NG11	270 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PTER	Q96BW5	349 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	RMDN1	Q96DB5	314 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TMEM175	Q9BSA9	504 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TTLL2	Q9BWV7	592 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	MRPL9	Q9BYD2	267 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	UNK	Q9C0B0	810 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	COQ10B	Q9H8M1	238 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ACSS2	Q9NR19	701 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PACSIN3	Q9UKS6	424 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	OAS3	Q9Y6K5	1087 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516	BRWD1	Q9NSI6	2320 aa		13.94	□□□□□ -0.18
NEDD4L-223	ENST00000588516		A0A087WXM4	84 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	UBA6	A0AVT1	1052 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	DHRS12	A0PJE2	317 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CCDC160	A6NGH7	325 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	UBXN8	O00124	270 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	UBFD1	O14562	309 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PIP5K1B	O14986	540 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	AKAP10	O43572	662 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	GMNN	O75496	209 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TMCC1	O94876	653 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ESR1	P03372	595 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TFAP2A	P05549	437 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	RPS17	P08708	135 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	HGF	P14210	728 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PKM	P14618	531 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ZNF23	P17027	643 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	EEF1D	P29692	281 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PTGER3	P43115	390 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PGF	P49763	221 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ZNF177	Q13360	481 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	SMU1	Q2TAY7	513 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	KCTD21	Q4G0X4	260 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TBCEL	Q5QJ74	424 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TMTC4	Q5T4D3	741 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	C6orf52	Q5T4I8	152 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	FAM171A1	Q5VUB5	890 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CLEC6A	Q6EIG7	209 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CERS6	Q6ZMG9	384 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	RBM44	Q6ZP01	1051 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	SATL1	Q86VE3	508 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ZNF280B	Q86YH2	543 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TBC1D21	Q8IYX1	336 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	HMGCLL1	Q8TB92	370 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	LRTOMT	Q8WZ04	291 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	LZIC	Q8WZA0	190 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	LRRC58	Q96CX6	371 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	RMND5B	Q96G75	393 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CENPN	Q96H22	339 aa	Predicted RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	HIC2	Q96JB3	615 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TRIB3	Q96RU7	358 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PRPF18	Q99633	342 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TMEM79	Q9BSE2	394 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ANKRD60	Q9BZ19	345 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	NACA2	Q9H009	215 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CLK4	Q9HAZ1	481 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	UBAP1	Q9NZ09	502 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	NUDT4	Q9NZJ9	180 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	POLG2	Q9UHN1	485 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CNOT6	Q9ULM6	557 aa	Known RBP	13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PCDHB7	Q9Y5E2	793 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PCDHB1	Q9Y5F3	818 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ARL5A	Q9Y689	179 aa		13.93	□□□□□ -0.18
NEDD4L-223	ENST00000588516	FAM234B	A2RU67	622 aa		13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516		H3BMM5	538 aa		13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	TLR5	O60602	858 aa		13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	EED	O75530	441 aa	Known RBP	13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	SLC22A3	O75751	556 aa		13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	ARHGEF15	O94989	841 aa		13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	BMP10	O95393	424 aa		13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CYBB	P04839	570 aa		13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	CKB	P12277	381 aa		13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	IL9	P15248	144 aa		13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	MSX2	P35548	267 aa	Predicted RBP	13.92	□□□□□ -0.18
NEDD4L-223	ENST00000588516	PPP3CC	P48454	512 aa		13.92	□□□□□ -0.18

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