RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 MAVSQ7Z434 540 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 HSD11B1LQ7Z5J1 315 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 SFTPA1Q8IWL2 248 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 CPNE9Q8IYJ1 553 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 INPP5DQ92835 1189 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 PHF21BQ96EK2 531 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 CCDC97Q96F63 343 aaPredicted RBP16.37■□□□□ 0.21
NFIX-210ENST00000588228 LINGO1Q96FE5 620 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 PDLIM5Q96HC4 596 aaKnown RBP16.37■□□□□ 0.21
NFIX-210ENST00000588228 COPS8Q99627 209 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 EBF4Q9BQW3 602 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 SARS2Q9NP81 518 aaKnown RBP16.37■□□□□ 0.21
NFIX-210ENST00000588228 TXLNGQ9NUQ3 528 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 SMOXQ9NWM0 555 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 THAP10Q9P2Z0 257 aaPredicted RBP16.37■□□□□ 0.21
NFIX-210ENST00000588228 SARDHQ9UL12 918 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 PPM1HQ9ULR3 514 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 NUMBLQ9Y6R0 609 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 PDE4DIPQ5VU43 2346 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 IGLV3-16A0A075B6K0 115 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 SYCE1LA8MT33 242 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 ARNTLO00327 626 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 FCHO1O14526 889 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 CCDC22O60826 627 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 DNAJC8O75937 253 aaPredicted RBP16.37■□□□□ 0.21
NFIX-210ENST00000588228 UNC5CO95185 931 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 ITGB7P26010 798 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 MMP12P39900 470 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 CCR10P46092 362 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 GALNT1Q10472 559 aaPredicted RBP16.37■□□□□ 0.21
NFIX-210ENST00000588228 POM121L1PQ3SYA9 428 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 EP400NLQ6ZTU2 488 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 NUDT18Q6ZVK8 323 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 ALYREFQ86V81 257 aaKnown RBP16.37■□□□□ 0.21
NFIX-210ENST00000588228 PIP4K2CQ8TBX8 421 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 SUSD6Q92537 303 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 CHFRQ96EP1 664 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 MSLNLQ96KJ4 702 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 RILPQ96NA2 401 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 TRMOQ9BU70 441 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 FAM83DQ9H4H8 585 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 ACSS2Q9NR19 701 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 SAR1AQ9NR31 198 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 RNF112Q9ULX5 631 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 APOBEC2Q9Y235 224 aaKnown RBP16.37■□□□□ 0.21
NFIX-210ENST00000588228 PRSS21Q9Y6M0 314 aa16.37■□□□□ 0.21
NFIX-210ENST00000588228 MUC22E2RYF6 1773 aaPredicted RBP16.36■□□□□ 0.21
NFIX-210ENST00000588228 UBXN8O00124 270 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 PSMD11O00231 422 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 MATN2O00339 956 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 BTN3A1O00481 513 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 MTHFD2P13995 350 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 LTBRP36941 435 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 LIG3P49916 1009 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 IDH3AP50213 366 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 NCALDP61601 193 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 HERVK_113P63132 956 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 TSNQ15631 228 aaKnown RBP16.36■□□□□ 0.21
NFIX-210ENST00000588228 ZNF678Q5SXM1 525 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 FRMD7Q6ZUT3 714 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 RAB44Q7Z6P3 723 aaPredicted RBP16.36■□□□□ 0.21
NFIX-210ENST00000588228 RAVER1Q8IY67 606 aaKnown RBP16.36■□□□□ 0.21
NFIX-210ENST00000588228 CLDN19Q8N6F1 224 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 EEF1AKMT1Q8WVE0 214 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 EXT2Q93063 718 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 PPP1R16AQ96I34 528 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 NECTIN4Q96NY8 510 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 TUBB6Q9BUF5 446 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 SPATA16Q9BXB7 569 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 ERVK-6Q9BXR3 956 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 NMUR2Q9GZQ4 415 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 COG4Q9H9E3 785 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 EML4Q9HC35 981 aaKnown RBP16.36■□□□□ 0.21
NFIX-210ENST00000588228 VTI1BQ9UEU0 232 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 SUN2Q9UH99 717 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 CD84Q9UIB8 345 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 ZDHHC2Q9UIJ5 367 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 IKZF3Q9UKT9 509 aa16.36■□□□□ 0.21
NFIX-210ENST00000588228 NPEPPSL1A6NEC2 478 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 CDC7O00311 574 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 HDAC3O15379 428 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 SLC25A14O95258 325 aaPredicted RBP16.35■□□□□ 0.21
NFIX-210ENST00000588228 APODP05090 189 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 IL12RB1P42701 662 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 TUBB3Q13509 450 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 SEL1L3Q68CR1 1132 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 EPGNQ6UW88 154 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 Q6ZVL8 140 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 DSG4Q86SJ6 1040 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 KIRREL3Q8IZU9 778 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 TRAM1L1Q8N609 369 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 PTGR2Q8N8N7 351 aaPredicted RBP16.35■□□□□ 0.21
NFIX-210ENST00000588228 STON2Q8WXE9 905 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 FUBP1Q96AE4 644 aaKnown RBP16.35■□□□□ 0.21
NFIX-210ENST00000588228 FAM129BQ96TA1 746 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 RPP25Q9BUL9 199 aaKnown RBP16.35■□□□□ 0.21
NFIX-210ENST00000588228 LATS2Q9NRM7 1088 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 EPS15L1Q9UBC2 864 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 PRDM4Q9UKN5 801 aa16.35■□□□□ 0.21
NFIX-210ENST00000588228 TMCO1Q9UM00 188 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms