RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 NUDCD3Q8IVD9 361 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 TRIM42Q8IWZ5 723 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 CACNA2D3Q8IZS8 1091 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 KDM1BQ8NB78 822 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 PPP1R14CQ8TAE6 165 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 PIP4K2CQ8TBX8 421 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 CSGALNACT1Q8TDX6 532 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 HEXDCQ8WVB3 486 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 ANKRD49Q8WVL7 239 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 EZH1Q92800 747 aaPredicted RBP10.1□□□□□ -0.79
APOC1-201ENST00000586638 SEC16BQ96JE7 1060 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 TCF12Q99081 682 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 BOCQ9BWV1 1114 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 TSSK1BQ9BXA7 367 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 CCDC68Q9H2F9 335 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 TMEM245Q9H330 911 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 ASB8Q9H765 288 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 LMAN1LQ9HAT1 526 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 NMRAL1Q9HBL8 299 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 GPAMQ9HCL2 828 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 FBRSL1Q9HCM7 1045 aaKnown RBP10.1□□□□□ -0.79
APOC1-201ENST00000586638 IL26Q9NPH9 171 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.1□□□□□ -0.79
APOC1-201ENST00000586638 CPSF2Q9P2I0 782 aaKnown RBP10.1□□□□□ -0.79
APOC1-201ENST00000586638 THAP10Q9P2Z0 257 aaPredicted RBP10.1□□□□□ -0.79
APOC1-201ENST00000586638 COPG2Q9UBF2 871 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 DKK3Q9UBP4 350 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 CD84Q9UIB8 345 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 CRLS1Q9UJA2 301 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 NDRG2Q9UN36 371 aaKnown RBP10.1□□□□□ -0.79
APOC1-201ENST00000586638 RUVBL2Q9Y230 463 aaKnown RBP10.1□□□□□ -0.79
APOC1-201ENST00000586638 USP24Q9UPU5 2620 aa10.1□□□□□ -0.79
APOC1-201ENST00000586638 SETXQ7Z333 2677 aaKnown RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 TRBV5-4A0A0C4DH59 114 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 G3V2L1 256 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 LYPLA1O75608 230 aaPredicted RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 PRNPP04156 253 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 APOA4P06727 396 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 LTA4HP09960 611 aaKnown RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 MYL2P10916 166 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 COL6A2P12110 1019 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 PKMP14618 531 aaKnown RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 CPA3P15088 417 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 ITGB7P26010 798 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 ACRV1P26436 265 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 SUOXP51687 545 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 KPNA2P52292 529 aaKnown RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 PTSQ03393 145 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 DMTNQ08495 405 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 SPEM2Q0P670 501 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 NFATC2Q13469 925 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 ARHGEF7Q14155 803 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 GKAP1Q5VSY0 366 aaPredicted RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 TXNDC11Q6PKC3 985 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 ZYG11AQ6WRX3 759 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 MAMSTRQ6ZN01 415 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 CBARPQ8N350 705 aaPredicted RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 FSTL5Q8N475 847 aaPredicted RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 CCDC197Q8NCU1 140 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 RAB3IL1Q8TBN0 382 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 LKAAEAR1Q8TD35 194 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 SCG3Q8WXD2 468 aaKnown RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 DNASE1L2Q92874 299 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 SGF29Q96ES7 293 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 LRIG1Q96JA1 1093 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 BIRC8Q96P09 236 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 GPR78Q96P69 363 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 GPR21Q99679 349 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 SLC30A3Q99726 388 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 WRAP53Q9BUR4 548 aaKnown RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 PITPNM3Q9BZ71 974 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 P2RY12Q9H244 342 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 ZNF395Q9H8N7 513 aaPredicted RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 PARD6AQ9NPB6 346 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 PRMT8Q9NR22 394 aaPredicted RBP10.09□□□□□ -0.79
APOC1-201ENST00000586638 PKD2L2Q9NZM6 624 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 GALPQ9UBC7 116 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 MID2Q9UJV3 735 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 APPL1Q9UKG1 709 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 VPS9D1Q9Y2B5 631 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 MED16Q9Y2X0 877 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 VWA7Q9Y334 891 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 PRSS21Q9Y6M0 314 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 STON1Q9Y6Q2 735 aa10.09□□□□□ -0.79
APOC1-201ENST00000586638 SPTBN2O15020 2390 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 SHISA7A6NL88 538 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 KLF11O14901 512 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 PFDN6O15212 129 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 SNX3O60493 162 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 VPS26AO75436 327 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 IL1BP01584 269 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 SERPINE1P05121 402 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 CCDC166P0CW27 439 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 ZNF37AP17032 561 aaPredicted RBP10.08□□□□□ -0.8
APOC1-201ENST00000586638 ZNF30P17039 623 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 ITGB6P18564 788 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 TFEBP19484 476 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 CTHP32929 405 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 TIE1P35590 1138 aa10.08□□□□□ -0.8
APOC1-201ENST00000586638 SPINT3P49223 89 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms