RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 SRPK1Q96SB4 655 aaKnown RBP18.55■□□□□ 0.56
ATG4D-203ENST00000585752 SPATA16Q9BXB7 569 aa18.55■□□□□ 0.56
ATG4D-203ENST00000585752 GPR63Q9BZJ6 419 aa18.55■□□□□ 0.56
ATG4D-203ENST00000585752 ZFYVE1Q9HBF4 777 aa18.55■□□□□ 0.56
ATG4D-203ENST00000585752 KCND1Q9NSA2 647 aa18.55■□□□□ 0.56
ATG4D-203ENST00000585752 PISDQ9UG56 409 aa18.55■□□□□ 0.56
ATG4D-203ENST00000585752 LOXL2Q9Y4K0 774 aa18.55■□□□□ 0.56
ATG4D-203ENST00000585752 ZFHX4Q86UP3 3567 aa18.55■□□□□ 0.56
ATG4D-203ENST00000585752 CASC3O15234 703 aaKnown RBP18.54■□□□□ 0.56
ATG4D-203ENST00000585752 NDST3O95803 873 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 HOXB3P14651 431 aaPredicted RBP18.54■□□□□ 0.56
ATG4D-203ENST00000585752 SLC2A4P14672 509 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 LMAN1P49257 510 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 OR1D5P58170 312 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 PYCR3Q53H96 274 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 TMEM164Q5U3C3 297 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 SFTPA2Q8IWL1 248 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 RASGEF1CQ8N431 466 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 MS4A14Q96JA4 679 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 WDR24Q96S15 920 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 AGAP2Q99490 1192 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 RMI1Q9H9A7 625 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 VPS18Q9P253 973 aa18.54■□□□□ 0.56
ATG4D-203ENST00000585752 CDRT15L2A8MXV6 281 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 SOD1P00441 154 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 FUCA1P04066 466 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 CASQ1P31415 396 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 GPR3P46089 330 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 PDX1P52945 283 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 MAPK10P53779 464 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 OASLQ15646 514 aaKnown RBP18.53■□□□□ 0.56
ATG4D-203ENST00000585752 CLPPQ16740 277 aaPredicted RBP18.53■□□□□ 0.56
ATG4D-203ENST00000585752 PARP6Q2NL67 630 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 ARHGAP40Q5TG30 622 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 LYSMD3Q7Z3D4 306 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 C17orf53Q8N3J3 647 aaPredicted RBP18.53■□□□□ 0.56
ATG4D-203ENST00000585752 SLC25A41Q8N5S1 370 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 PRR11Q96HE9 360 aaPredicted RBP18.53■□□□□ 0.56
ATG4D-203ENST00000585752 SLC38A3Q99624 504 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 FICDQ9BVA6 458 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 KCNK4Q9NYG8 393 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 TTC7AQ9ULT0 858 aaPredicted RBP18.53■□□□□ 0.56
ATG4D-203ENST00000585752 SHOC2Q9UQ13 582 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 SAR1BQ9Y6B6 198 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 SCN8AQ9UQD0 1980 aa18.53■□□□□ 0.56
ATG4D-203ENST00000585752 CACNA1GO43497 2377 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 TRBV23OR9-2A0A075B6M9 112 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 E7EVH7 732 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 PSMD3O43242 534 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 SLC25A14O95258 325 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-203ENST00000585752 HGFP14210 728 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 HLA-DPA1P20036 260 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 SLC5A2P31639 672 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 GDF10P55107 478 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 B4GALNT1Q00973 533 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 COL9A2Q14055 689 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-203ENST00000585752 IHHQ14623 411 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 TAF1BQ53T94 588 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-203ENST00000585752 ALS2CLQ60I27 953 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 DRICH1Q6PGQ1 229 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-203ENST00000585752 CCDC81Q6ZN84 652 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 USP53Q70EK8 1073 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 CLEC14AQ86T13 490 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 NAGSQ8N159 534 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 ACTRT1Q8TDG2 376 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 COG1Q8WTW3 980 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 PTCD2Q8WV60 388 aaKnown RBP18.52■□□□□ 0.56
ATG4D-203ENST00000585752 MAGOHBQ96A72 148 aaKnown RBP18.52■□□□□ 0.56
ATG4D-203ENST00000585752 TADA1Q96BN2 335 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 SCARF2Q96GP6 870 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-203ENST00000585752 OXNAD1Q96HP4 312 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-203ENST00000585752 COX14Q96I36 57 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 DPYSL5Q9BPU6 564 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 ZSCAN5AQ9BUG6 496 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 AP1M1Q9BXS5 423 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 RDH14Q9HBH5 336 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 CPNE5Q9HCH3 593 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 MAGEE1Q9HCI5 957 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 PAK5Q9P286 719 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 DRG1Q9Y295 367 aaKnown RBP18.52■□□□□ 0.56
ATG4D-203ENST00000585752 PLEKHM1Q9Y4G2 1056 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 PCDHB11Q9Y5F2 797 aa18.52■□□□□ 0.56
ATG4D-203ENST00000585752 LAMA5O15230 3695 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 ITPR1Q14643 2758 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 A0A1W2PNU3 283 aaPredicted RBP18.51■□□□□ 0.55
ATG4D-203ENST00000585752 EPOP01588 193 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 FDFT1P37268 417 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 PAFAH1B1P43034 410 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 ZFP36L1Q07352 338 aaKnown RBP18.51■□□□□ 0.55
ATG4D-203ENST00000585752 VAC14Q08AM6 782 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 SIX1Q15475 284 aaPredicted RBP18.51■□□□□ 0.55
ATG4D-203ENST00000585752 HENMT1Q5T8I9 393 aaKnown RBP18.51■□□□□ 0.55
ATG4D-203ENST00000585752 KDELC1Q6UW63 502 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 C4orf22Q6V702 233 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 SLC9B2Q86UD5 537 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 TAB3Q8N5C8 712 aaPredicted RBP18.51■□□□□ 0.55
ATG4D-203ENST00000585752 OR10G6Q8NH81 332 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 SLC39A7Q92504 469 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 SH3KBP1Q96B97 665 aa18.51■□□□□ 0.55
ATG4D-203ENST00000585752 RTP4Q96DX8 246 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms