RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 BOCQ9BWV1 1114 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 TEX101Q9BY14 249 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 SENP1Q9P0U3 644 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.98■□□□□ 0.15
SS18-226ENST00000585241 MBD1Q9UIS9 605 aaPredicted RBP15.98■□□□□ 0.15
SS18-226ENST00000585241 DMTF1Q9Y222 760 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 CRYL1Q9Y2S2 319 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 ACTL7BQ9Y614 415 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 BPTFQ12830 3046 aa15.98■□□□□ 0.15
SS18-226ENST00000585241 EML5Q05BV3 1969 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 HMGB1P1B2RPK0 211 aaPredicted RBP15.97■□□□□ 0.15
SS18-226ENST00000585241 LAMTOR5O43504 91 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 RFPL1O75677 317 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 PCCBP05166 539 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 HOXC4P09017 264 aaPredicted RBP15.97■□□□□ 0.15
SS18-226ENST00000585241 FDXRP22570 491 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 HNRNPA2B1P22626 353 aaKnown RBP15.97■□□□□ 0.15
SS18-226ENST00000585241 MAT2AP31153 395 aaKnown RBP15.97■□□□□ 0.15
SS18-226ENST00000585241 CCNFP41002 786 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 SERPINB8P50452 374 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 CDK3Q00526 305 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 DMWDQ09019 674 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 GPS2Q13227 327 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 KHDC1Q4VXA5 237 aaKnown RBP15.97■□□□□ 0.15
SS18-226ENST00000585241 USP39Q53GS9 565 aaKnown RBP15.97■□□□□ 0.15
SS18-226ENST00000585241 RBM20Q5T481 1227 aaKnown RBP15.97■□□□□ 0.15
SS18-226ENST00000585241 HECTD2Q5U5R9 776 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 SLC36A4Q6YBV0 504 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 C1orf210Q8IVY1 113 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 FBXL6Q8N531 539 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 FAM160A2Q8N612 972 aaPredicted RBP15.97■□□□□ 0.15
SS18-226ENST00000585241 GOLGA6L1Q8N7Z2 621 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 FRMD1Q8N878 549 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 TMEM145Q8NBT3 493 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 ACVR1CQ8NER5 493 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 ACMSDQ8TDX5 336 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 KLK6Q92876 244 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 ATXN7L3BQ96GX2 97 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 HIC2Q96JB3 615 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 SPACA7Q96KW9 195 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 ORAI3Q9BRQ5 295 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 GPR174Q9BXC1 333 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 FAM53CQ9NYF3 392 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 GNPTGQ9UJJ9 305 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 MED16Q9Y2X0 877 aa15.97■□□□□ 0.15
SS18-226ENST00000585241 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.97■□□□□ 0.15
SS18-226ENST00000585241 UBA6A0AVT1 1052 aaPredicted RBP15.96■□□□□ 0.15
SS18-226ENST00000585241 CFAP99D6REC4 459 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 H3BMM5 538 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 TOR1BO14657 336 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 AP2A2O94973 939 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 SLC25A14O95258 325 aaPredicted RBP15.96■□□□□ 0.15
SS18-226ENST00000585241 WISP3O95389 354 aaPredicted RBP15.96■□□□□ 0.15
SS18-226ENST00000585241 KRT15P19012 456 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 TAS2R39P59534 338 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 TIAL1Q01085 375 aaKnown RBP eCLIP15.96■□□□□ 0.15
SS18-226ENST00000585241 EXOC3L1Q86VI1 746 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 HEATR4Q86WZ0 1026 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 GPATCH11Q8N954 259 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 DTWD2Q8NBA8 298 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 KCNJ9Q92806 393 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 ZBTB9Q96C00 473 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 BIRC7Q96CA5 298 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 SERAC1Q96JX3 654 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 ZCCHC2Q9C0B9 1178 aaKnown RBP15.96■□□□□ 0.15
SS18-226ENST00000585241 CLPBQ9H078 707 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 CENPHQ9H3R5 247 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 EPHX3Q9H6B9 360 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 WDR26Q9H7D7 661 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 EBF2Q9HAK2 575 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 POPDC3Q9HBV1 291 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 TRIM39Q9HCM9 518 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 SNX15Q9NRS6 342 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 FBXO4Q9UKT5 387 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 VWA7Q9Y334 891 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 HS3ST3A1Q9Y663 406 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 PRSS21Q9Y6M0 314 aa15.96■□□□□ 0.15
SS18-226ENST00000585241 A0A1W2PPC4 97 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 A0A1W2PPM1 405 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 METTL12A8MUP2 240 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 PRAMEF26H0Y7S4 382 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 H3BQF6 201 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 QSOX1O00391 747 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 TPP1O14773 563 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 INPP4BO15327 924 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 SLC31A1O15431 190 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 SGTAO43765 313 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 VEGFDO43915 354 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 MT-ND3P03897 115 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 RALBP11234 206 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 ATP1B2P14415 290 aaPredicted RBP15.95■□□□□ 0.14
SS18-226ENST00000585241 MSH3P20585 1137 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 FMO4P31512 558 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 AKT2P31751 481 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 KIAA1024LP59773 190 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 SLC18A2Q05940 514 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 INPP5AQ14642 412 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 USP10Q14694 798 aaKnown RBP15.95■□□□□ 0.14
SS18-226ENST00000585241 HSP90B2PQ58FF3 399 aa15.95■□□□□ 0.14
SS18-226ENST00000585241 GCNT7Q6ZNI0 430 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms