RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SLC35B2	Q8TB61	432 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	BLOC1S5	Q8TDH9	187 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	PATE1	Q8WXA2	126 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	GLYATL1	Q969I3	302 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	GRAMD1A	Q96CP6	724 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	MED8	Q96G25	268 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	ATXN7L3B	Q96GX2	97 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	VPS35	Q96QK1	796 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	FICD	Q9BVA6	458 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	CARD9	Q9H257	536 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	SYNDIG1	Q9H7V2	258 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	RMI1	Q9H9A7	625 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	IL17C	Q9P0M4	197 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	LRIT1	Q9P2V4	623 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	ATXN10	Q9UBB4	475 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	TMPRSS11E	Q9UL52	423 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	GUCA1B	Q9UMX6	200 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	PRKAB1	Q9Y478	270 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	C5orf60	A6NFR6	353 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	GPR89A	B7ZAQ6	455 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	NUAK1	O60285	661 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	WISP1	O95388	367 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	ECEL1	O95672	775 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	AGT	P01019	485 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	CCDC175	P0C221	793 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	GPR89B	P0CG08	455 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZNF8	P17098	575 aa	Predicted RBP	13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	RBMS1	P29558	406 aa	Known RBP	13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	OLIG2	Q13516	323 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	PEX6	Q13608	980 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	ATP13A5	Q4VNC0	1218 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	KHDC1	Q4VXA5	237 aa	Known RBP	13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	C3orf38	Q5JPI3	329 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZNF648	Q5T619	568 aa	Predicted RBP	13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	B3GNT8	Q7Z7M8	397 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	PHYKPL	Q8IUZ5	450 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	ARL14	Q8N4G2	192 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	SNRNP27	Q8WVK2	155 aa	Known RBP	13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	LRRN3	Q9H3W5	708 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	BPIFA1	Q9NP55	256 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	ARFGAP3	Q9NP61	516 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	IL26	Q9NPH9	171 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZNHIT2	Q9UHR6	403 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	SATB2	Q9UPW6	733 aa		13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760	AAR2	Q9Y312	384 aa	Known RBP	13.16	□□□□□ -0.3
SREBF1-223	ENST00000584760		A6NCN8	305 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	GAPDHS	O14556	408 aa	Predicted RBP	13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	CHUK	O15111	745 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	GPR39	O43194	453 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	SLC25A14	O95258	325 aa	Predicted RBP	13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	EML2	O95834	649 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	PTMA	P06454	111 aa	Known RBP	13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	ACP5	P13686	325 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	SPAM1	P38567	509 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	GDF10	P55107	478 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	B4GALNT1	Q00973	533 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	MSLN	Q13421	630 aa	Predicted RBP	13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	PRPSAP1	Q14558	356 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZDHHC20	Q5W0Z9	365 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	FOXR1	Q6PIV2	292 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	CHST15	Q7LFX5	561 aa	Predicted RBP	13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	PRICKLE2	Q7Z3G6	844 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	ADGRG6	Q86SQ4	1221 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760		Q8N9G6	341 aa	Predicted RBP	13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	FAM71D	Q8N9W8	422 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	DTX3L	Q8TDB6	740 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	UBE2Q2	Q8WVN8	375 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	ATG4A	Q8WYN0	398 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	SLC46A1	Q96NT5	459 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	PPP1R2P1	Q96PQ5	205 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	GFM1	Q96RP9	751 aa	Known RBP	13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	APOL2	Q9BQE5	337 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	OR2AG1	Q9H205	316 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	TRIM39	Q9HCM9	518 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	WDR70	Q9NW82	654 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	KCNK6	Q9Y257	313 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	MYO18B	Q8IUG5	2567 aa		13.15	□□□□□ -0.3
SREBF1-223	ENST00000584760	PMS2P1	A4D2B8	440 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760		K7ENP7	123 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	GRID2	O43424	1007 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	BUD23	O43709	281 aa	Known RBP	13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	PPFIA2	O75334	1257 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	MTX2	O75431	263 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	CCKBR	P32239	447 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	FASLG	P48023	281 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	OASL	Q15646	514 aa	Known RBP	13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	CHRNA6	Q15825	494 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	SEL1L2	Q5TEA6	688 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	MEI1	Q5TIA1	1274 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	KCTD11	Q693B1	232 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	DENND5A	Q6IQ26	1287 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	INO80C	Q6PI98	192 aa	Predicted RBP	13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	IGF2-AS	Q6U949	168 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	CRTC3	Q6UUV7	619 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	FAM151B	Q6UXP7	276 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	CCDC81	Q6ZN84	652 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	TMPRSS9	Q7Z410	1059 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	SFRP1	Q8N474	314 aa		13.14	□□□□□ -0.31
SREBF1-223	ENST00000584760	SLC37A2	Q8TED4	501 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms